Literature DB >> 15966970

Evaluation of hybridisation on oligonucleotide microarrays for analysis of drug-resistant Mycobacterium tuberculosis.

D Gryadunov1, V Mikhailovich, S Lapa, N Roudinskii, M Donnikov, S Pan'kov, O Markova, A Kuz'min, L Chernousova, O Skotnikova, A Moroz, A Zasedatelev, A Mirzabekov.   

Abstract

A molecular approach was developed to identify drug-resistant strains of Mycobacterium tuberculosis by means of biochips with oligonucleotides immobilised in polyacrylamide gel pads. The technique was based on multiplex PCR, followed by hybridisation on an oligonucleotide microarray, and detected > 95% of rifampicin-resistant and c. 80% of isoniazid-resistant M. tuberculosis isolates within 12 h. In total, 220 drug-resistant isolates and 131 clinical samples were tested using biochips. The sensitivity and specificity of the developed method were comparable with those of standard bacteriological testing of M. tuberculosis drug resistance.

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Year:  2005        PMID: 15966970     DOI: 10.1111/j.1469-0691.2005.01183.x

Source DB:  PubMed          Journal:  Clin Microbiol Infect        ISSN: 1198-743X            Impact factor:   8.067


  22 in total

1.  Evaluation of one- and two-color gene expression arrays for microbial comparative genome hybridization analyses in routine applications.

Authors:  Roland Schwarz; Biju Joseph; Gabriele Gerlach; Anja Schramm-Glück; Kathrin Engelhard; Matthias Frosch; Tobias Müller; Christoph Schoen
Journal:  J Clin Microbiol       Date:  2010-06-30       Impact factor: 5.948

2.  Evaluation of the TB-Biochip oligonucleotide microarray system for rapid detection of rifampin resistance in Mycobacterium tuberculosis.

Authors:  Janice C Caoili; Angelina Mayorova; David Sikes; Laura Hickman; Bonnie B Plikaytis; Thomas M Shinnick
Journal:  J Clin Microbiol       Date:  2006-07       Impact factor: 5.948

3.  Tuberculous spondylitis in Russia and prominent role of multidrug-resistant clone Mycobacterium tuberculosis Beijing B0/W148.

Authors:  Anna Vyazovaya; Igor Mokrousov; Natalia Solovieva; Alexander Mushkin; Olga Manicheva; Boris Vishnevsky; Viacheslav Zhuravlev; Olga Narvskaya
Journal:  Antimicrob Agents Chemother       Date:  2015-02-02       Impact factor: 5.191

Review 4.  Basic concepts of microarrays and potential applications in clinical microbiology.

Authors:  Melissa B Miller; Yi-Wei Tang
Journal:  Clin Microbiol Rev       Date:  2009-10       Impact factor: 26.132

5.  Demonstrating a multi-drug resistant Mycobacterium tuberculosis amplification microarray.

Authors:  Yvonne Linger; Alexander Kukhtin; Julia Golova; Alexander Perov; Peter Qu; Christopher Knickerbocker; Christopher G Cooney; Darrell P Chandler
Journal:  J Vis Exp       Date:  2014-04-25       Impact factor: 1.355

6.  Comparative Study of Novel Fluorescent Cyanine Nucleotides: Hybridization Analysis of Labeled PCR Products Using a Biochip.

Authors:  V E Shershov; S A Lapa; V E Kuznetsova; M A Spitsyn; T O Guseinov; S A Polyakov; A A Stomahin; A S Zasedatelev; A V Chudinov
Journal:  J Fluoresc       Date:  2017-07-28       Impact factor: 2.217

Review 7.  Laboratory diagnosis of tuberculosis in resource-poor countries: challenges and opportunities.

Authors:  Linda M Parsons; Akos Somoskövi; Cristina Gutierrez; Evan Lee; C N Paramasivan; Alash'le Abimiku; Steven Spector; Giorgio Roscigno; John Nkengasong
Journal:  Clin Microbiol Rev       Date:  2011-04       Impact factor: 26.132

8.  Frequency and Distribution of Tuberculosis Resistance-Associated Mutations between Mumbai, Moldova, and Eastern Cape.

Authors:  S B Georghiou; M Seifert; D Catanzaro; R S Garfein; F Valafar; V Crudu; C Rodrigues; T C Victor; A Catanzaro; T C Rodwell
Journal:  Antimicrob Agents Chemother       Date:  2016-06-20       Impact factor: 5.191

9.  Performance of Cepheid ® Xpert MTB/RIF ® and TB-Biochip ® MDR in two regions of Russia with a high prevalence of drug-resistant tuberculosis.

Authors:  E V Kurbatova; D A Kaminski; V V Erokhin; G V Volchenkov; S N Andreevskaya; L N Chernousova; O V Demikhova; J V Ershova; N V Kaunetis; T A Kuznetsova; E E Larionova; T G Smirnova; T R Somova; I A Vasilieva; A V Vorobieva; S S Zolkina; J P Cegielski
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2012-12-22       Impact factor: 3.267

10.  Genetic evaluation of relationship between mutations in rpoB and resistance of Mycobacterium tuberculosis to rifampin.

Authors:  Anna Zaczek; Anna Brzostek; Ewa Augustynowicz-Kopec; Zofia Zwolska; Jaroslaw Dziadek
Journal:  BMC Microbiol       Date:  2009-01-15       Impact factor: 3.605

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