Literature DB >> 15962222

Single-nucleotide polymorphisms associated with symptomatic infection and differential human gene expression in healthy seropositive persons each implicate the cytoskeleton, integrin signaling, and oncosuppression in the pathogenesis of human parvovirus B19 infection.

Jonathan R Kerr1, Narendra Kaushik, David Fear, Don A Baldwin, Emile F Nuwaysir, Ian M Adcock.   

Abstract

This study was undertaken to further examine the role of the host response to parvovirus B19 in the development of symptoms and consequences of viral persistence. Genomic DNA from 42 patients with symptomatic B19 infection was analyzed using the HuSNP assay (Affymetrix), and the results were compared with those from analysis of 53 healthy control individuals. Fifty-seven single-nucleotide polymorphisms were identified that were significantly associated with symptomatic infection. Total RNA from peripheral blood mononuclear cells from 57 B19-seropositive and 13 B19-seronegative donors was analyzed by hybridization to a single-color microarray representing 9522 human genes. Ninety-two genes were shown to be differentially expressed. Differential expression was confirmed in 6 of 38 genes (SKIP, MACF1, SPAG7, FLOT1, c6orf48, and RASSF5) tested using real-time quantitative polymerase chain reaction in a different group of healthy subjects. Genes identified in both studies play a functional role in the cytoskeleton, integrin signaling, and oncosuppression, themes that have been shown to be important in parvovirus infections.

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Year:  2005        PMID: 15962222     DOI: 10.1086/430950

Source DB:  PubMed          Journal:  J Infect Dis        ISSN: 0022-1899            Impact factor:   5.226


  10 in total

Review 1.  Basic concepts of microarrays and potential applications in clinical microbiology.

Authors:  Melissa B Miller; Yi-Wei Tang
Journal:  Clin Microbiol Rev       Date:  2009-10       Impact factor: 26.132

2.  Leukoencephalopathy associated with parvovirus infection in Cretan hound puppies.

Authors:  D Schaudien; Z Polizopoulou; A Koutinas; S Schwab; D Porombka; W Baumgärtner; C Herden
Journal:  J Clin Microbiol       Date:  2010-06-30       Impact factor: 5.948

Review 3.  Human Parvoviruses.

Authors:  Jianming Qiu; Maria Söderlund-Venermo; Neal S Young
Journal:  Clin Microbiol Rev       Date:  2017-01       Impact factor: 26.132

4.  Genome-wide association study among four horse breeds identifies a common haplotype associated with in vitro CD3+ T cell susceptibility/resistance to equine arteritis virus infection.

Authors:  Yun Young Go; Ernest Bailey; Deborah G Cook; Stephen J Coleman; James N Macleod; Kuey-Chu Chen; Peter J Timoney; Udeni B R Balasuriya
Journal:  J Virol       Date:  2011-10-12       Impact factor: 5.103

5.  Identification of innate immunity genes and pathways using a comparative genomics approach.

Authors:  Scott Alper; Rebecca Laws; Brad Lackford; Windy A Boyd; Paul Dunlap; Jonathan H Freedman; David A Schwartz
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-07       Impact factor: 11.205

6.  Genetic dissection of granulomatous enterocolitis and arthritis in the intramural peptidoglycan-polysaccharide-treated rat model of IBD.

Authors:  A Bleich; S Hopf; H J Hedrich; H A van Lith; F Li; R Balfour Sartor; M Mähler
Journal:  Inflamm Bowel Dis       Date:  2009-06-12       Impact factor: 5.325

Review 7.  Past, present and future molecular diagnosis and characterization of human immunodeficiency virus infections.

Authors:  Yi-Wei Tang; Chin-Yih Ou
Journal:  Emerg Microbes Infect       Date:  2012-08-22       Impact factor: 7.163

8.  The small-nucleolar RNAs commonly used for microRNA normalisation correlate with tumour pathology and prognosis.

Authors:  H E Gee; F M Buffa; C Camps; A Ramachandran; R Leek; M Taylor; M Patil; H Sheldon; G Betts; J Homer; C West; J Ragoussis; A L Harris
Journal:  Br J Cancer       Date:  2011-03-15       Impact factor: 7.640

9.  Cryptic sequence features in the active postmortem transcriptome.

Authors:  Peter A Noble; Alexander E Pozhitkov
Journal:  BMC Genomics       Date:  2018-09-14       Impact factor: 3.969

10.  Expression profile of genes involved in pathogenesis of pediatric Crohn's disease.

Authors:  Winnie H Sim; Josef Wagner; Donald J Cameron; Anthony G Catto-Smith; Ruth F Bishop; Carl D Kirkwood
Journal:  J Gastroenterol Hepatol       Date:  2012-06       Impact factor: 4.029

  10 in total

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