Literature DB >> 15957595

Study of temporal stationarity and spatial consistency of fMRI noise using independent component analysis.

Gregory H Turner1, Donald B Twieg.   

Abstract

Spatial independent component analysis (ICA) was used to study the temporal stationarity and spatial consistency of structured functional MRI (fMRI) noise. Spatial correlations have been used in the past to generate filters for the removal of structured noise for each time-course in an fMRI dataset. It would be beneficial to produce a multivariate filter based on the same principles. ICA is examined to determine if it has properties that are beneficial for this type of filtering. Six fMRI baseline datasets were decomposed via spatial ICA. The time-courses associated with each component were tested for wide-sense stationarity using the wide sense stationarity quotient (WSS). Each dataset was divided into three subsets and each subset was decomposed. The components of first and third subset were matched by the strength of their correlation. The components produced by ICA were found to have largely nonstationary time-courses. Despite the temporal nonstationarity in the data, ICA was found to produce consistent spatial components. The degree of correlation among components differed depending on the amount of dimension reduction performed on the data. It was found that a relatively small number of dimensions produced components that are potentially useful for generating a spatial fMRI filter.

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Year:  2005        PMID: 15957595     DOI: 10.1109/TMI.2005.846852

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  12 in total

1.  A resting state fMRI analysis pipeline for pooling inference across diverse cohorts: an ENIGMA rs-fMRI protocol.

Authors:  Bhim M Adhikari; Neda Jahanshad; Dinesh Shukla; Jessica Turner; Dominik Grotegerd; Udo Dannlowski; Harald Kugel; Jennifer Engelen; Bruno Dietsche; Axel Krug; Tilo Kircher; Els Fieremans; Jelle Veraart; Dmitry S Novikov; Premika S W Boedhoe; Ysbrand D van der Werf; Odile A van den Heuvel; Jonathan Ipser; Anne Uhlmann; Dan J Stein; Erin Dickie; Aristotle N Voineskos; Anil K Malhotra; Fabrizio Pizzagalli; Vince D Calhoun; Lea Waller; Ilja M Veer; Hernik Walter; Robert W Buchanan; David C Glahn; L Elliot Hong; Paul M Thompson; Peter Kochunov
Journal:  Brain Imaging Behav       Date:  2019-10       Impact factor: 3.978

2.  A survey of the sources of noise in fMRI.

Authors:  Douglas N Greve; Gregory G Brown; Bryon A Mueller; Gary Glover; Thomas T Liu
Journal:  Psychometrika       Date:  2012-11-14       Impact factor: 2.500

3.  Abnormal functional network connectivity among resting-state networks in children with frontal lobe epilepsy.

Authors:  E Widjaja; M Zamyadi; C Raybaud; O C Snead; M L Smith
Journal:  AJNR Am J Neuroradiol       Date:  2013-07-18       Impact factor: 3.825

4.  Functional network connectivity during rest and task conditions: a comparative study.

Authors:  Mohammad R Arbabshirani; Martin Havlicek; Kent A Kiehl; Godfrey D Pearlson; Vince D Calhoun
Journal:  Hum Brain Mapp       Date:  2012-06-26       Impact factor: 5.038

5.  Altered intrinsic connectivity networks in frontal lobe epilepsy: a resting-state fMRI study.

Authors:  Xinzhi Cao; Zhiyu Qian; Qiang Xu; Junshu Shen; Zhiqiang Zhang; Guangming Lu
Journal:  Comput Math Methods Med       Date:  2014-11-26       Impact factor: 2.238

6.  Mentalizing in male schizophrenia patients is compromised by virtue of dysfunctional connectivity between task-positive and task-negative networks.

Authors:  Pritha Das; Vince Calhoun; Gin S Malhi
Journal:  Schizophr Res       Date:  2012-07-12       Impact factor: 4.939

7.  Altered resting-state functional network connectivity in profound sensorineural hearing loss infants within an early sensitive period: A group ICA study.

Authors:  Shanshan Wang; Boyu Chen; Yalian Yu; Huaguang Yang; Wenzhuo Cui; Guoguang Fan; Jian Li
Journal:  Hum Brain Mapp       Date:  2021-06-01       Impact factor: 5.038

8.  Classification of schizophrenia patients based on resting-state functional network connectivity.

Authors:  Mohammad R Arbabshirani; Kent A Kiehl; Godfrey D Pearlson; Vince D Calhoun
Journal:  Front Neurosci       Date:  2013-07-30       Impact factor: 4.677

9.  Changes in brain functional network connectivity after stroke.

Authors:  Wei Li; Yapeng Li; Wenzhen Zhu; Xi Chen
Journal:  Neural Regen Res       Date:  2014-01-01       Impact factor: 5.135

10.  A method for functional network connectivity among spatially independent resting-state components in schizophrenia.

Authors:  Madiha J Jafri; Godfrey D Pearlson; Michael Stevens; Vince D Calhoun
Journal:  Neuroimage       Date:  2007-11-13       Impact factor: 6.556

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