Literature DB >> 15955923

Update on proteomics in Arabidopsis. Where do we go from here?

Scott C Peck1.   

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Year:  2005        PMID： 15955923      PMCID： PMC1150380          DOI： 10.1104/pp.105.060285

Source DB:  PubMed          Journal:  Plant Physiol        ISSN： 0032-0889            Impact factor:   8.340


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  36 in total

1.  Translation control: bridging the gap between genomics and proteomics?

Authors:  B Pradet-Balade; F Boulmé; H Beug; E W Müllner; J A Garcia-Sanz
Journal:  Trends Biochem Sci       Date:  2001-04       Impact factor: 13.807

Review 2.  Mass spectrometry in proteomics.

Authors:  R Aebersold; D R Goodlett
Journal:  Chem Rev       Date:  2001-02       Impact factor: 60.622

3.  Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae.

Authors:  Scott B Ficarro; Mark L McCleland; P Todd Stukenberg; Daniel J Burke; Mark M Ross; Jeffrey Shabanowitz; Donald F Hunt; Forest M White
Journal:  Nat Biotechnol       Date:  2002-03       Impact factor: 54.908

Review 4.  Chemical strategies for functional proteomics.

Authors:  Gregory C Adam; Erik J Sorensen; Benjamin F Cravatt
Journal:  Mol Cell Proteomics       Date:  2002-10       Impact factor: 5.911

5.  Shotgun identification of protein modifications from protein complexes and lens tissue.

Authors:  Michael J MacCoss; W Hayes McDonald; Anita Saraf; Rovshan Sadygov; Judy M Clark; Joseph J Tasto; Kathleen L Gould; Dirk Wolters; Michael Washburn; Avery Weiss; John I Clark; John R Yates
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

6.  A novel experimental design for comparative two-dimensional gel analysis: two-dimensional difference gel electrophoresis incorporating a pooled internal standard.

Authors:  Andrew Alban; Stephen Olu David; Lennart Bjorkesten; Christian Andersson; Erik Sloge; Steve Lewis; Ian Currie
Journal:  Proteomics       Date:  2003-01       Impact factor: 3.984

Review 7.  Proteomic insights into ubiquitin and ubiquitin-like proteins.

Authors:  Carilee Denison; Donald S Kirkpatrick; Steven P Gygi
Journal:  Curr Opin Chem Biol       Date:  2005-02       Impact factor: 8.822

8.  Validation and development of fluorescence two-dimensional differential gel electrophoresis proteomics technology.

Authors:  R Tonge; J Shaw; B Middleton; R Rowlinson; S Rayner; J Young; F Pognan; E Hawkins; I Currie; M Davison
Journal:  Proteomics       Date:  2001-03       Impact factor: 3.984

9.  Proteomic survey of metabolic pathways in rice.

Authors:  Antonius Koller; Michael P Washburn; B Markus Lange; Nancy L Andon; Cosmin Deciu; Paul A Haynes; Lara Hays; David Schieltz; Ryan Ulaszek; Jing Wei; Dirk Wolters; John R Yates
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-05       Impact factor: 11.205

10.  Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis.

Authors:  Georg H H Borner; D Janine Sherrier; Timothy J Stevens; Isaiah T Arkin; Paul Dupree
Journal:  Plant Physiol       Date:  2002-06       Impact factor: 8.340
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  11 in total

1.  Absolute quantitation of isoforms of post-translationally modified proteins in transgenic organism.

Authors:  Yaojun Li; Yiwei Shu; Changchao Peng; Lin Zhu; Guangyu Guo; Ning Li
Journal:  Mol Cell Proteomics       Date:  2012-03-22       Impact factor: 5.911

2.  Molecular interactions between the specialist herbivore Manduca sexta (Lepidoptera, Sphingidae) and its natural host Nicotiana attenuata. VII. Changes in the plant's proteome.

Authors:  Ashok P Giri; Hendrik Wünsche; Sirsha Mitra; Jorge A Zavala; Alexander Muck; Ales Svatos; Ian T Baldwin
Journal:  Plant Physiol       Date:  2006-10-06       Impact factor: 8.340

3.  Putting the pieces together: high-performance LC-MS/MS provides network-, pathway-, and protein-level perspectives in Populus.

Authors:  Paul Abraham; Richard J Giannone; Rachel M Adams; Udaya Kalluri; Gerald A Tuskan; Robert L Hettich
Journal:  Mol Cell Proteomics       Date:  2012-10-16       Impact factor: 5.911

4.  Proteome dynamics during plastid differentiation in rice.

Authors:  Torsten Kleffmann; Anne von Zychlinski; Doris Russenberger; Matthias Hirsch-Hoffmann; Peter Gehrig; Wilhelm Gruissem; Sacha Baginsky
Journal:  Plant Physiol       Date:  2006-12-22       Impact factor: 8.340

5.  Looking deep inside: detection of low-abundance proteins in leaf extracts of Arabidopsis and phloem exudates of pumpkin.

Authors:  Andreas Fröhlich; Frank Gaupels; Hakan Sarioglu; Christian Holzmeister; Manuel Spannagl; Jörg Durner; Christian Lindermayr
Journal:  Plant Physiol       Date:  2012-05-03       Impact factor: 8.340

6.  Mapping the Arabidopsis organelle proteome.

Authors:  Tom P J Dunkley; Svenja Hester; Ian P Shadforth; John Runions; Thilo Weimar; Sally L Hanton; Julian L Griffin; Conrad Bessant; Federica Brandizzi; Chris Hawes; Rod B Watson; Paul Dupree; Kathryn S Lilley
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-17       Impact factor: 11.205

7.  A heterocomplex of iron superoxide dismutases defends chloroplast nucleoids against oxidative stress and is essential for chloroplast development in Arabidopsis.

Authors:  Fumiyoshi Myouga; Chieko Hosoda; Taishi Umezawa; Haruko Iizumi; Takashi Kuromori; Reiko Motohashi; Yuriko Shono; Noriko Nagata; Masahiko Ikeuchi; Kazuo Shinozaki
Journal:  Plant Cell       Date:  2008-11-07       Impact factor: 11.277

8.  Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms.

Authors:  Sigrun Reumann; Lavanya Babujee; Changle Ma; Stephanie Wienkoop; Tanja Siemsen; Gerardo E Antonicelli; Nicolas Rasche; Franziska Lüder; Wolfram Weckwerth; Olaf Jahn
Journal:  Plant Cell       Date:  2007-10-19       Impact factor: 11.277

9.  Protein-protein interactions of tandem affinity purified protein kinases from rice.

Authors:  Jai S Rohila; Mei Chen; Shuo Chen; Johann Chen; Ronald L Cerny; Christopher Dardick; Patrick Canlas; Hiroaki Fujii; Michael Gribskov; Siddhartha Kanrar; Lucas Knoflicek; Becky Stevenson; Mingtang Xie; Xia Xu; Xianwu Zheng; Jian-Kang Zhu; Pamela Ronald; Michael E Fromm
Journal:  PLoS One       Date:  2009-08-19       Impact factor: 3.240

10.  Modifications to the Arabidopsis defense proteome occur prior to significant transcriptional change in response to inoculation with Pseudomonas syringae.

Authors:  Alexandra M E Jones; Vincent Thomas; Mark H Bennett; John Mansfield; Murray Grant
Journal:  Plant Physiol       Date:  2006-10-06       Impact factor: 8.340
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