Literature DB >> 15955921

Evolutionary and ecological genomics of Arabidopsis.

Kentaro K Shimizu1, Michael D Purugganan.   

Abstract

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Year:  2005        PMID： 15955921      PMCID： PMC1150378          DOI： 10.1104/pp.105.061655

Source DB:  PubMed          Journal:  Plant Physiol        ISSN： 0032-0889            Impact factor:   8.340


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  32 in total

Review 1.  Range shifts and adaptive responses to Quaternary climate change.

Authors:  M B Davis; R G Shaw
Journal:  Science       Date:  2001-04-27       Impact factor: 47.728

2.  Heterogeneous selection at specific loci in natural environments in Arabidopsis thaliana.

Authors:  Cynthia Weinig; Lisa A Dorn; Nolan C Kane; Zachary M German; Solveig S Halldorsdottir; Mark C Ungerer; Yuko Toyonaga; Trudy F C Mackay; Michael D Purugganan; Johanna Schmitt
Journal:  Genetics       Date:  2003-09       Impact factor: 4.562

3.  Mapping quantitative trait loci in multiple populations of Arabidopsis thaliana identifies natural allelic variation for trichome density.

Authors:  V Vaughan Symonds; A Veronica Godoy; Teresa Alconada; Javier F Botto; Thomas E Juenger; Jorge J Casal; Alan M Lloyd
Journal:  Genetics       Date:  2005-01-16       Impact factor: 4.562

4.  A QTL for flowering time in Arabidopsis reveals a novel allele of CRY2.

Authors:  S El-Din El-Assal; C Alonso-Blanco; A J Peeters; V Raz; M Koornneef
Journal:  Nat Genet       Date:  2001-12       Impact factor: 38.330

5.  Natural variation in light sensitivity of Arabidopsis.

Authors:  J N Maloof; J O Borevitz; T Dabi; J Lutes; R B Nehring; J L Redfern; G T Trainer; J M Wilson; T Asami; C C Berry; D Weigel; J Chory
Journal:  Nat Genet       Date:  2001-12       Impact factor: 38.330

6.  Darwinian selection on a selfing locus.

Authors:  Kentaro K Shimizu; Jennifer M Cork; Ana L Caicedo; Charlotte A Mays; Richard C Moore; Kenneth M Olsen; Stephanie Ruzsa; Graham Coop; Carlos D Bustamante; Philip Awadalla; Michael D Purugganan
Journal:  Science       Date:  2004-12-17       Impact factor: 47.728

7.  Selection on rapidly evolving proteins in the Arabidopsis genome.

Authors:  Marianne Barrier; Carlos D Bustamante; Jiaye Yu; Michael D Purugganan
Journal:  Genetics       Date:  2003-02       Impact factor: 4.562

8.  A latitudinal cline in flowering time in Arabidopsis thaliana modulated by the flowering time gene FRIGIDA.

Authors:  John R Stinchcombe; Cynthia Weinig; Mark Ungerer; Kenneth M Olsen; Charlotte Mays; Solveig S Halldorsdottir; Michael D Purugganan; Johanna Schmitt
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-19       Impact factor: 11.205

9.  Host-parasite coevolutionary conflict between Arabidopsis and downy mildew.

Authors:  Rebecca L Allen; Peter D Bittner-Eddy; Laura J Grenville-Briggs; Julia C Meitz; Anne P Rehmany; Laura E Rose; Jim L Beynon
Journal:  Science       Date:  2004-12-10       Impact factor: 47.728

10.  Attractive and repulsive interactions between female and male gametophytes in Arabidopsis pollen tube guidance.

Authors:  K K Shimizu; K Okada
Journal:  Development       Date:  2000-10       Impact factor: 6.868
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  19 in total

1.  Genome structures and transcriptomes signify niche adaptation for the multiple-ion-tolerant extremophyte Schrenkiella parvula.

Authors:  Dong-Ha Oh; Hyewon Hong; Sang Yeol Lee; Dae-Jin Yun; Hans J Bohnert; Maheshi Dassanayake
Journal:  Plant Physiol       Date:  2014-02-21       Impact factor: 8.340

2.  A population genomics study of the Arabidopsis core cell cycle genes shows the signature of natural selection.

Authors:  Roel Sterken; Raphaël Kiekens; Emmy Coppens; Ilse Vercauteren; Marc Zabeau; Dirk Inzé; Jonathan Flowers; Marnik Vuylsteke
Journal:  Plant Cell       Date:  2009-10-30       Impact factor: 11.277

3.  Genome-wide patterns of Arabidopsis gene expression in nature.

Authors:  Christina L Richards; Ulises Rosas; Joshua Banta; Naeha Bhambhra; Michael D Purugganan
Journal:  PLoS Genet       Date:  2012-04-19       Impact factor: 5.917

4.  Phytotoxic effects of 21 plant secondary metabolites on Arabidopsis thaliana germination and root growth.

Authors:  M J Reigosa; E Malvido-Pazos
Journal:  J Chem Ecol       Date:  2007-07       Impact factor: 2.793

5.  Genetic transformation of Arabidopsis lyrata: specific expression of the green fluorescent protein (GFP) in pistil tissues.

Authors:  Isabelle Fobis-Loisy; Pierre Chambrier; Thierry Gaude
Journal:  Plant Cell Rep       Date:  2007-01-05       Impact factor: 4.964

6.  Coexistence of trichome variation in a natural plant population: a combined study using ecological and candidate gene approaches.

Authors:  Tetsuhiro Kawagoe; Kentaro K Shimizu; Tetsuji Kakutani; Hiroshi Kudoh
Journal:  PLoS One       Date:  2011-07-19       Impact factor: 3.240

Review 7.  Plant sexual reproduction during climate change: gene function in natura studied by ecological and evolutionary systems biology.

Authors:  Kentaro K Shimizu; Hiroshi Kudoh; Masaki J Kobayashi
Journal:  Ann Bot       Date:  2011-08-17       Impact factor: 4.357

8.  The predominantly selfing plant Arabidopsis thaliana experienced a recent reduction in transposable element abundance compared to its outcrossing relative Arabidopsis lyrata.

Authors:  Nicole de la Chaux; Takashi Tsuchimatsu; Kentaro K Shimizu; Andreas Wagner
Journal:  Mob DNA       Date:  2012-02-07

9.  The effect of growth conditions on the seed size/number trade-off.

Authors:  Cloé Paul-Victor; Lindsay A Turnbull
Journal:  PLoS One       Date:  2009-09-10       Impact factor: 3.240

10.  Recent loss of self-incompatibility by degradation of the male component in allotetraploid Arabidopsis kamchatica.

Authors:  Takashi Tsuchimatsu; Pascal Kaiser; Chow-Lih Yew; Julien B Bachelier; Kentaro K Shimizu
Journal:  PLoS Genet       Date:  2012-07-26       Impact factor: 5.917
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