Literature DB >> 15951385

An autocatalytic step in the reaction cycle of hydrogenase from Thiocapsa roseopersicina can explain the special characteristics of the enzyme reaction.

Judit Osz1, Csaba Bagyinka.   

Abstract

A moving front has been observed as a special pattern during the hydrogenase-catalyzed reaction of hydrogen uptake with benzyl viologen as electron acceptor in a thin-layer reaction chamber. Such fronts start spontaneously and at random times at different points of the reaction chamber; blue spheres are seen expanding at constant speed and amplitude. The number of observable starting points depends on the hydrogenase concentration. Fronts can be initiated by injecting either a small amount of completed reaction mixture or activated hydrogenase, but not by injecting a low concentration of reduced benzyl viologen. These characteristics are consistent with an autocatalytic reaction step in the enzyme reaction. The special characteristics of the hydrogen-uptake reaction in the bulk reaction (a long lag phase, and the enzyme concentration dependence of the lag phase) support the autocatalytic nature. We conclude that there is at least one autocatalytic reaction step in the hydrogenase-catalyzed reaction. The two possible autocatalytic schemes for hydrogenase are prion-type autocatalysis, in which two enzyme forms interact, and product-activation autocatalysis, where a reduced electron acceptor and an inactive enzyme form interact. The experimental results strongly support the occurrence of prion-type autocatalysis.

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Year:  2005        PMID: 15951385      PMCID: PMC1366701          DOI: 10.1529/biophysj.105.059220

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  18 in total

1.  Autocatalytic oscillations in the early phase of the photoreduced methyl viologen-initiated fast kinetic reaction of hydrogenase.

Authors:  Csaba Bagyinka; Judit Osz; Sándor Száaraz
Journal:  J Biol Chem       Date:  2003-03-27       Impact factor: 5.157

Review 2.  Hydrogenases: active site puzzles and progress.

Authors:  Fraser A Armstrong
Journal:  Curr Opin Chem Biol       Date:  2004-04       Impact factor: 8.822

3.  Theoretical calculations on hydrogenase kinetics: explanation of the lag phase and the enzyme concentration dependence of the activity of hydrogenase uptake.

Authors:  Judit Osz; Gabriella Bodó; Rui Miguel Mamede Branca; Csaba Bagyinka
Journal:  Biophys J       Date:  2005-06-10       Impact factor: 4.033

4.  The interaction of hydrogenase with oxygen.

Authors:  H F FISHER; A I KRASNA; D RITTENBERG
Journal:  J Biol Chem       Date:  1954-08       Impact factor: 5.157

5.  Crystal structure of the nickel-iron hydrogenase from Desulfovibrio gigas.

Authors:  A Volbeda; M H Charon; C Piras; E C Hatchikian; M Frey; J C Fontecilla-Camps
Journal:  Nature       Date:  1995-02-16       Impact factor: 49.962

6.  Simple formal kinetics for the reversible uptake of molecular hydrogen by [Ni-Fe] hydrogenase from Desulfovibrio gigas.

Authors:  A L De Lacey; J Moiroux; C Bourdillon
Journal:  Eur J Biochem       Date:  2000-11

7.  Unusual organization of the genes coding for HydSL, the stable [NiFe]hydrogenase in the photosynthetic bacterium Thiocapsa roseopersicina BBS.

Authors:  G Rakhely; A Colbeau; J Garin; P M Vignais; K L Kovacs
Journal:  J Bacteriol       Date:  1998-03       Impact factor: 3.490

8.  Direct detection of a hydrogen ligand in the [NiFe] center of the regulatory H2-sensing hydrogenase from Ralstonia eutropha in its reduced state by HYSCORE and ENDOR spectroscopy.

Authors:  Marc Brecht; Maurice van Gastel; Thorsten Buhrke; Bärbel Friedrich; Wolfgang Lubitz
Journal:  J Am Chem Soc       Date:  2003-10-29       Impact factor: 15.419

9.  Single crystal EPR studies of the reduced active site of [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F.

Authors:  Stefanie Foerster; Matthias Stein; Marc Brecht; Hideaki Ogata; Yoshiki Higuchi; Wolfgang Lubitz
Journal:  J Am Chem Soc       Date:  2003-01-08       Impact factor: 15.419

10.  Hydrogen-induced activation of the [NiFe]-hydrogenase from Allochromatium vinosum as studied by stopped-flow infrared spectroscopy.

Authors:  Sergei Kurkin; Simon J George; Roger N F Thorneley; Simon P J Albracht
Journal:  Biochemistry       Date:  2004-06-01       Impact factor: 3.162

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  3 in total

1.  Theoretical calculations on hydrogenase kinetics: explanation of the lag phase and the enzyme concentration dependence of the activity of hydrogenase uptake.

Authors:  Judit Osz; Gabriella Bodó; Rui Miguel Mamede Branca; Csaba Bagyinka
Journal:  Biophys J       Date:  2005-06-10       Impact factor: 4.033

2.  Concentration-dependent front velocity of the autocatalytic hydrogenase reaction.

Authors:  Gabriella Bodó; Rui M M Branca; Agota Tóth; Dezsó Horváth; Csaba Bagyinka
Journal:  Biophys J       Date:  2009-06-17       Impact factor: 4.033

3.  Site-specific tryptophan oxidation induced by autocatalytic reaction of polysorbate 20 in protein formulation.

Authors:  Xanthe M Lam; William G Lai; Edwin K Chan; Victor Ling; Chung C Hsu
Journal:  Pharm Res       Date:  2011-06-08       Impact factor: 4.200

  3 in total

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