Literature DB >> 15950056

Structural and biochemical studies of GH family 12 cellulases: improved thermal stability, and ligand complexes.

Mats Sandgren1, Jerry Ståhlberg, Colin Mitchinson.   

Abstract

In this review we will describe how we have gathered structural and biochemical information from several homologous cellulases from one class of glycoside hydrolases (GH family 12), and used this information within the framework of a protein-engineering program for the design of new variants of these enzymes. These variants have been characterized to identify some of the positions and the types of mutations in the enzymes that are responsible for some of the biochemical differences in thermal stability and activity between the homologous enzymes. In this process we have solved the three-dimensional structure of four of these homologous GH 12 cellulases: Three fungal enzymes, Humicola grisea Cel12A, Hypocrea jecorina Cel12A and Hypocrea schweinitzii Cel12A, and one bacterial, Streptomyces sp. 11AG8 Cel12A. We have also determined the three-dimensional structures of the two most stable H. jecorina Cel12A variants. In addition, four ligand-complex structures of the wild-type H. grisea Cel12A enzyme have been solved and have made it possible to characterize some of the interactions between substrate and enzyme. The structural and biochemical studies of these related GH 12 enzymes, and their variants, have provided insight on how specific residues contribute to protein thermal stability and enzyme activity. This knowledge can serve as a structural toolbox for the design of Cel12A enzymes with specific properties and features suited to existing or new applications.

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Year:  2004        PMID: 15950056     DOI: 10.1016/j.pbiomolbio.2004.11.002

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  27 in total

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Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-03-25

2.  BcXYG1, a Secreted Xyloglucanase from Botrytis cinerea, Triggers Both Cell Death and Plant Immune Responses.

Authors:  Wenjun Zhu; Mordechi Ronen; Yonatan Gur; Anna Minz-Dub; Gal Masrati; Nir Ben-Tal; Alon Savidor; Itai Sharon; Elad Eizner; Oliver Valerius; Gerhard H Braus; Kyle Bowler; Maor Bar-Peled; Amir Sharon
Journal:  Plant Physiol       Date:  2017-07-14       Impact factor: 8.340

3.  Insertion of endocellulase catalytic domains into thermostable consensus ankyrin scaffolds: effects on stability and cellulolytic activity.

Authors:  Eva S Cunha; Christine L Hatem; Doug Barrick
Journal:  Appl Environ Microbiol       Date:  2013-08-23       Impact factor: 4.792

4.  A revised architecture of primary cell walls based on biomechanical changes induced by substrate-specific endoglucanases.

Authors:  Yong Bum Park; Daniel J Cosgrove
Journal:  Plant Physiol       Date:  2012-02-23       Impact factor: 8.340

5.  C-terminal flanking peptide stabilized the catalytic domain of a recombinant Bacillus subtilis endo-β-1, 4-glucanase.

Authors:  Yujuan Wang; Jun Wang
Journal:  Protein J       Date:  2013-04       Impact factor: 2.371

6.  Loop 3 of Fungal Endoglucanases of Glycoside Hydrolase Family 12 Modulates Catalytic Efficiency.

Authors:  Hong Yang; Pengjun Shi; Yun Liu; Wei Xia; Xiaoyu Wang; Huifang Cao; Rui Ma; Huiying Luo; Yingguo Bai; Bin Yao
Journal:  Appl Environ Microbiol       Date:  2017-03-02       Impact factor: 4.792

7.  A Phytophthora sojae Glycoside Hydrolase 12 Protein Is a Major Virulence Factor during Soybean Infection and Is Recognized as a PAMP.

Authors:  Zhenchuan Ma; Tianqiao Song; Lin Zhu; Wenwu Ye; Yang Wang; Yuanyuan Shao; Suomeng Dong; Zhengguang Zhang; Daolong Dou; Xiaobo Zheng; Brett M Tyler; Yuanchao Wang
Journal:  Plant Cell       Date:  2015-07-10       Impact factor: 11.277

8.  Structural basis for inhibition of xyloglucan-specific endo-β-1,4-glucanase (XEG) by XEG-protein inhibitor.

Authors:  Takuya Yoshizawa; Toshiyuki Shimizu; Hisashi Hirano; Mamoru Sato; Hiroshi Hashimoto
Journal:  J Biol Chem       Date:  2012-04-10       Impact factor: 5.157

9.  Comparative secretome analyses of two Trichoderma reesei RUT-C30 and CL847 hypersecretory strains.

Authors:  Isabelle Herpoël-Gimbert; Antoine Margeot; Alain Dolla; Gwénaël Jan; Daniel Mollé; Sabrina Lignon; Hughes Mathis; Jean-Claude Sigoillot; Frédéric Monot; Marcel Asther
Journal:  Biotechnol Biofuels       Date:  2008-12-23       Impact factor: 6.040

Review 10.  Fungal bioconversion of lignocellulosic residues; opportunities & perspectives.

Authors:  Mehdi Dashtban; Heidi Schraft; Wensheng Qin
Journal:  Int J Biol Sci       Date:  2009-09-04       Impact factor: 6.580

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