Literature DB >> 15949441

Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.

Ning Gao1, Andrey V Zavialov, Wen Li, Jayati Sengupta, Mikel Valle, Richard P Gursky, Måns Ehrenberg, Joachim Frank.   

Abstract

Ribosome recycling, the disassembly of the posttermination complex after each round of protein synthesis, is an essential step in mRNA translation, but its mechanism has remained obscure. In eubacteria, recycling is catalyzed by RRF (ribosome recycling factor) and EF-G (elongation factor G). By using cryo-electron microscopy, we have obtained two density maps, one of the RRF bound posttermination complex and one of the 50S subunit bound with both EF-G and RRF. Comparing the two maps, we found domain I of RRF to be in the same orientation, while domain II in the EF-G-containing 50S subunit is extensively rotated (approximately 60 degrees) compared to its orientation in the 70S complex. Mapping the 50S conformation of RRF onto the 70S posttermination complex suggests that it can disrupt the intersubunit bridges B2a and B3, and thus effect a separation of the two subunits. These observations provide the structural basis for the mechanism by which the posttermination complex is split into subunits by the joint action of RRF and EF-G.

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Year:  2005        PMID: 15949441     DOI: 10.1016/j.molcel.2005.05.005

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  49 in total

1.  Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome.

Authors:  Jie Zhou; Laura Lancaster; Sergei Trakhanov; Harry F Noller
Journal:  RNA       Date:  2011-12-20       Impact factor: 4.942

2.  Another burst of smoke: atomic resolution structures of RF3 bound to the ribosome.

Authors:  Megan E McDonald; Rachel Green
Journal:  RNA       Date:  2012-02-17       Impact factor: 4.942

3.  Structural insights into initial and intermediate steps of the ribosome-recycling process.

Authors:  Takeshi Yokoyama; Tanvir R Shaikh; Nobuhiro Iwakura; Hideko Kaji; Akira Kaji; Rajendra K Agrawal
Journal:  EMBO J       Date:  2012-03-02       Impact factor: 11.598

4.  HflX is a ribosome-splitting factor rescuing stalled ribosomes under stress conditions.

Authors:  Yanqing Zhang; Chandra Sekhar Mandava; Wei Cao; Xiaojing Li; Dejiu Zhang; Ningning Li; Yixiao Zhang; Xiaoxiao Zhang; Yan Qin; Kaixia Mi; Jianlin Lei; Suparna Sanyal; Ning Gao
Journal:  Nat Struct Mol Biol       Date:  2015-10-12       Impact factor: 15.369

5.  Destabilization of the P site codon-anticodon helix results from movement of tRNA into the P/E hybrid state within the ribosome.

Authors:  Kevin G McGarry; Sarah E Walker; Huanyu Wang; Kurt Fredrick
Journal:  Mol Cell       Date:  2005-11-23       Impact factor: 17.970

Review 6.  Mechanism of recycling of post-termination ribosomal complexes in eubacteria: a new role of initiation factor 3.

Authors:  Anuradha Seshadri; Umesh Varshney
Journal:  J Biosci       Date:  2006-06       Impact factor: 1.826

7.  Interaction between the ribosomal subunits: 16S rRNA suppressors of the lethal DeltaA1916 mutation in the 23S rRNA of Escherichia coli.

Authors:  Michael O'connor
Journal:  Mol Genet Genomics       Date:  2007-06-13       Impact factor: 3.291

8.  The process of mRNA-tRNA translocation.

Authors:  Joachim Frank; Haixiao Gao; Jayati Sengupta; Ning Gao; Derek J Taylor
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-14       Impact factor: 11.205

9.  Helix 69 in 23S rRNA modulates decoding by wild type and suppressor tRNAs.

Authors:  Michael O'Connor
Journal:  Mol Genet Genomics       Date:  2009-07-15       Impact factor: 3.291

10.  Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits.

Authors:  Ning Gao; Andrey V Zavialov; Måns Ehrenberg; Joachim Frank
Journal:  J Mol Biol       Date:  2007-10-16       Impact factor: 5.469

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