Literature DB >> 15945670

Gear formalism of the always stable predictor-corrector method for molecular dynamics of polarizable molecules.

Jirí Kolafa1.   

Abstract

The recently proposed always stable predictor-corrector method for molecular dynamics of polarizable molecules [J. Kolafa, J. Comput. Chem. 25, 335 (2004)] is rewritten in the Gear formalism. This equivalent form simplifies an implementation if the Newton equations of motion are integrated by the Gear method and also enables a variable integration step. Algorithms are presented for both the original and new versions and tested on a pair of polarizable ions exhibiting anharmonic vibrations.

Year:  2005        PMID: 15945670     DOI: 10.1063/1.1884107

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  Efficient treatment of induced dipoles.

Authors:  Andrew C Simmonett; Frank C Pickard; Yihan Shao; Thomas E Cheatham; Bernard R Brooks
Journal:  J Chem Phys       Date:  2015-08-21       Impact factor: 3.488

2.  Polarizable Atomic Multipole-based Molecular Mechanics for Organic Molecules.

Authors:  Pengyu Ren; Chuanjie Wu; Jay W Ponder
Journal:  J Chem Theory Comput       Date:  2011-10-11       Impact factor: 6.006

  2 in total

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