Literature DB >> 15943979

Linear motifs: evolutionary interaction switches.

Victor Neduva1, Robert B Russell.   

Abstract

Linear motifs are short sequence patterns associated with a particular function. They differ fundamentally from longer, globular protein domains in terms of their binding affinities, evolution and in how they are found experimentally or computationally. In this Minireview, we discuss various aspects of these critically important functional regions.

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Year:  2005        PMID: 15943979     DOI: 10.1016/j.febslet.2005.04.005

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  127 in total

1.  The structural basis of Edc3- and Scd6-mediated activation of the Dcp1:Dcp2 mRNA decapping complex.

Authors:  Simon A Fromm; Vincent Truffault; Julia Kamenz; Joerg E Braun; Niklas A Hoffmann; Elisa Izaurralde; Remco Sprangers
Journal:  EMBO J       Date:  2011-11-15       Impact factor: 11.598

2.  The Argonaute-binding platform of NRPE1 evolves through modulation of intrinsically disordered repeats.

Authors:  Joshua T Trujillo; Mark A Beilstein; Rebecca A Mosher
Journal:  New Phytol       Date:  2016-07-19       Impact factor: 10.151

3.  Diacyltransferase Activity and Chain Length Specificity of Mycobacterium tuberculosis PapA5 in the Synthesis of Alkyl β-Diol Lipids.

Authors:  Megan H Touchette; Gopal R Bommineni; Richard J Delle Bovi; John E Gadbery; Carrie D Nicora; Anil K Shukla; Jennifer E Kyle; Thomas O Metz; Dwight W Martin; Nicole S Sampson; W Todd Miller; Peter J Tonge; Jessica C Seeliger
Journal:  Biochemistry       Date:  2015-08-24       Impact factor: 3.162

4.  Mining alpha-helix-forming molecular recognition features with cross species sequence alignments.

Authors:  Yugong Cheng; Christopher J Oldfield; Jingwei Meng; Pedro Romero; Vladimir N Uversky; A Keith Dunker
Journal:  Biochemistry       Date:  2007-11-01       Impact factor: 3.162

Review 5.  Genetic constraints on protein evolution.

Authors:  Manel Camps; Asael Herman; Ern Loh; Lawrence A Loeb
Journal:  Crit Rev Biochem Mol Biol       Date:  2007 Sep-Oct       Impact factor: 8.250

Review 6.  The animal in the genome: comparative genomics and evolution.

Authors:  Richard R Copley
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-04-27       Impact factor: 6.237

7.  Protonation-dependent conformational variability of intrinsically disordered proteins.

Authors:  Leonhard Geist; Morkos A Henen; Sandra Haiderer; Thomas C Schwarz; Dennis Kurzbach; Anna Zawadzka-Kazimierczuk; Saurabh Saxena; Szymon Zerko; Wiktor Koźmiński; Dariush Hinderberger; Robert Konrat
Journal:  Protein Sci       Date:  2013-09       Impact factor: 6.725

8.  Regulation of the E3 ubiquitin ligase activity of MDM2 by an N-terminal pseudo-substrate motif.

Authors:  Erin G Worrall; Bartosz Wawrzynow; Liam Worrall; Malcolm Walkinshaw; Kathryn L Ball; Ted R Hupp
Journal:  J Chem Biol       Date:  2009-05-16

9.  Functional Analysis of Short Linear Motifs in the Plant Cyclin-Dependent Kinase Inhibitor SIAMESE.

Authors:  Narender Kumar; Renee Dale; Daniel Kemboi; Elizabeth A Zeringue; Naohiro Kato; John C Larkin
Journal:  Plant Physiol       Date:  2018-06-14       Impact factor: 8.340

10.  Global analysis of phosphorylation networks in humans.

Authors:  Jianfei Hu; Hee-Sool Rho; Robert H Newman; Woochang Hwang; John Neiswinger; Heng Zhu; Jin Zhang; Jiang Qian
Journal:  Biochim Biophys Acta       Date:  2013-03-21
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