Literature DB >> 15943917

Investigation of three strategies for an international genetic evaluation of beef cattle weaning weight.

Florence Phocas1, Kath Donoghue, Hans Ulrich Graser.   

Abstract

Weaning weights from 83,389 Limousin calves born between 1993 and 2002 in France and the Trans-Tasman block (Australia/New Zealand) were analysed to compare different strategies for running an international genetic evaluation for the breed. These records were a subset of the complete data for both countries and comprised a sample of herds that had recorded progeny of sires used across both countries. Genetic and phenotypic parameters for weaning weight were estimated within the countries. The estimates of direct genetic heritabilities were higher in France than in the Trans-Tasman block (0.31 vs. 0.22), while direct-maternal genetic correlations were less negative in the Trans-Tasman block (-0.10) than in France (-0.21). Different strategies for an international evaluation were studied, and the correlations between the estimated breeding values (EBV) of national evaluations and these strategies were derived. The international evaluation strategies were a) an animal model on raw performance data with non unity genetic correlations and heterogeneous residual and genetic variances across countries; b) the same animal model applied to pre-corrected (for fixed effects) performance data; and c) a sire model on de-regressed proofs (MACE). Estimates of the genetic correlations between weaning weight in both countries were 0.86 (0.80) for direct (maternal) genetic effects for the first strategy. Estimation of variance components by MACE appeared to be very sensitive to the sample of bulls and their reliability approximations. Variance component estimates obtained using pre-corrected data were inconsistent with estimates on raw data. However, the EBV predicted using pre-corrected data and parameters estimated from the raw data were similar to those predicted from raw data. Correlations between national and international EBV were always high (> 0.90) for sires, whichever genetic effect (direct or maternal) or international evaluation model was considered. The ranking of the bulls in the top 100 is of primary interest in terms of international genetic evaluation. In this study, some re-ranking of sires was observed for the top 100 bulls between countries and between the three international evaluation models. Thus, the origin of top sires may vary according to the implemented international evaluation strategy.

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Year:  2005        PMID: 15943917      PMCID: PMC2697215          DOI: 10.1186/1297-9686-37-5-361

Source DB:  PubMed          Journal:  Genet Sel Evol        ISSN: 0999-193X            Impact factor:   4.297


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  3 in total

1.  Impact of sub-setting the data of the main Limousin beef cattle population on the estimates of across-country genetic correlations.

Authors:  Renzo Bonifazi; Jeremie Vandenplas; Jan Ten Napel; Kaarina Matilainen; Roel F Veerkamp; Mario P L Calus
Journal:  Genet Sel Evol       Date:  2020-06-23       Impact factor: 4.297

2.  Scanning the genomes of parents for imprinted loci acting in their un-genotyped progeny.

Authors:  Inga Blunk; Manfred Mayer; Henning Hamann; Norbert Reinsch
Journal:  Sci Rep       Date:  2019-01-24       Impact factor: 4.379

3.  International single-step SNPBLUP beef cattle evaluations for Limousin weaning weight.

Authors:  Renzo Bonifazi; Mario P L Calus; Jan Ten Napel; Roel F Veerkamp; Alexis Michenet; Simone Savoia; Andrew Cromie; Jérémie Vandenplas
Journal:  Genet Sel Evol       Date:  2022-09-04       Impact factor: 5.100

  3 in total

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