Literature DB >> 15941742

MineBlast: a literature presentation service supporting protein annotation by data mining of BLAST results.

Guido Dieterich1, Uwe Kärst, Jürgen Wehland, Lothar Jänsch.   

Abstract

MineBlast is a web service for literature search and presentation based on data-mining results received from UniProt. Users can submit a simple list of protein sequences via a web-based interface. MineBlast performs a BLASTP search in UniProt to identify names and synonyms based on homologous proteins and subsequently queries PubMed, using combined search terms inorder to find and present relevant literature.

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Year:  2005        PMID： 15941742     DOI： 10.1093/bioinformatics/bti528

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  4 in total

1.  GeneReporter--sequence-based document retrieval and annotation.

Authors:  Annekathrin Bartsch; Boyke Bunk; Isam Haddad; Johannes Klein; Richard Münch; Thorsten Johl; Uwe Kärst; Lothar Jänsch; Dieter Jahn; Ida Retter
Journal:  Bioinformatics       Date:  2011-02-09       Impact factor: 6.937

2.  LEGER: knowledge database and visualization tool for comparative genomics of pathogenic and non-pathogenic Listeria species.

Authors:  Guido Dieterich; Uwe Kärst; Elmar Fischer; Jürgen Wehland; Lothar Jänsch
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

3.  PubServer: literature searches by homology.

Authors:  Lukasz Jaroszewski; Laszlo Koska; Mayya Sedova; Adam Godzik
Journal:  Nucleic Acids Res       Date:  2014-06-23       Impact factor: 16.971

4.  OmixLitMiner: A Bioinformatics Tool for Prioritizing Biological Leads from 'Omics Data Using Literature Retrieval and Data Mining.

Authors:  Pascal Steffen; Jemma Wu; Shubhang Hariharan; Hannah Voss; Vijay Raghunath; Mark P Molloy; Hartmut Schlüter
Journal:  Int J Mol Sci       Date:  2020-02-19       Impact factor: 5.923
  4 in total

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