Literature DB >> 15940006

Circular dichroism spectroscopy for the study of protein-ligand interactions.

Alison Rodger1, Rachel Marrington, David Roper, Stuart Windsor.   

Abstract

Circular dichroism (CD) is the difference in absorption of left and right circularly polarized light, usually by a solution containing the molecules of interest. A signal is only measured for chiral molecules such as proteins. A CD spectrum provides information about the bonds and structures responsible for this chirality. When a small molecule (or ligand) binds to a protein, it acquires an induced CD (ICD) spectrum through chiral perturbation to its structure or electron rearrangements. The wavelengths of this ICD are determined by the ligand's own absorption spectrum, and the intensity of the ICD spectrum is determined by the strength and geometry of its interaction with the protein. Thus, ICD can be used to probe the binding of ligands to proteins. This chapter outlines protein CD and ICD, together with some of the issues relating to experimental design and implementation.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15940006     DOI: 10.1385/1-59259-912-5:343

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  5 in total

1.  Netropsin binding in five duplex-dimer DNA constructs as a function of size and distance between binding sites: circular dichroism and absorption spectroscopy.

Authors:  Lavanya Premvardhan; Jean-Claude Maurizot
Journal:  Eur Biophys J       Date:  2009-10-28       Impact factor: 1.733

2.  Analysis of protein-ligand interactions from titrations and nuclear magnetic resonance relaxation dispersions.

Authors:  Emil Björklund; Anna du Rietz; Patrik Lundström
Journal:  Protein Sci       Date:  2021-11-30       Impact factor: 6.725

3.  Phosphorylation of eukaryotic initiation factor eIFiso4E enhances the binding rates to VPg of turnip mosaic virus.

Authors:  Mateen A Khan; Pankaj Kumar; Mohd Akif; Hiroshi Miyoshi
Journal:  PLoS One       Date:  2021-11-04       Impact factor: 3.240

4.  Target identification among known drugs by deep learning from heterogeneous networks.

Authors:  Xiangxiang Zeng; Siyi Zhu; Weiqiang Lu; Zehui Liu; Jin Huang; Yadi Zhou; Jiansong Fang; Yin Huang; Huimin Guo; Lang Li; Bruce D Trapp; Ruth Nussinov; Charis Eng; Joseph Loscalzo; Feixiong Cheng
Journal:  Chem Sci       Date:  2020-01-13       Impact factor: 9.969

5.  The Secondary Structure of a Major Wine Protein is Modified upon Interaction with Polyphenols.

Authors:  Mattia Di Gaspero; Paolo Ruzza; Rohanah Hussain; Claudia Honisch; Barbara Biondi; Giuliano Siligardi; Matteo Marangon; Andrea Curioni; Simone Vincenzi
Journal:  Molecules       Date:  2020-04-03       Impact factor: 4.411

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.