Literature DB >> 15936660

Here a virus, there a virus, everywhere the same virus?

Mya Breitbart1, Forest Rohwer.   

Abstract

There are an estimated 10(31) viruses on Earth, most of which are phages that infect bacteria. Metagenomic analyses have shown that environmental viral communities are incredibly diverse. There are an estimated 5000 viral genotypes in 200 liters of seawater and possibly a million different viral genotypes in one kilogram of marine sediment. By contrast, some culturing and molecular studies have found that viruses move between different biomes. Together, these findings suggest that viral diversity could be high on a local scale but relatively limited globally. Also, by moving between environments, viruses can facilitate horizontal gene transfer.

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Year:  2005        PMID: 15936660     DOI: 10.1016/j.tim.2005.04.003

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  257 in total

1.  Structural studies of E73 from a hyperthermophilic archaeal virus identify the "RH3" domain, an elaborated ribbon-helix-helix motif involved in DNA recognition.

Authors:  Casey Schlenker; Anupam Goel; Brian P Tripet; Smita Menon; Taylor Willi; Mensur Dlakić; Mark J Young; C Martin Lawrence; Valérie Copié
Journal:  Biochemistry       Date:  2012-03-22       Impact factor: 3.162

2.  Identification of novel positive-strand RNA viruses by metagenomic analysis of archaea-dominated Yellowstone hot springs.

Authors:  Benjamin Bolduc; Daniel P Shaughnessy; Yuri I Wolf; Eugene V Koonin; Francisco F Roberto; Mark Young
Journal:  J Virol       Date:  2012-02-29       Impact factor: 5.103

Review 3.  Endogenous viruses: insights into viral evolution and impact on host biology.

Authors:  Cédric Feschotte; Clément Gilbert
Journal:  Nat Rev Genet       Date:  2012-03-16       Impact factor: 53.242

4.  Diversity and abundance of single-stranded DNA viruses in human feces.

Authors:  Min-Soo Kim; Eun-Jin Park; Seong Woon Roh; Jin-Woo Bae
Journal:  Appl Environ Microbiol       Date:  2011-09-23       Impact factor: 4.792

5.  Dormancy contributes to the maintenance of microbial diversity.

Authors:  Stuart E Jones; Jay T Lennon
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-15       Impact factor: 11.205

6.  Short regions of sequence identity between the genomes of bacteria and human.

Authors:  Yudong Liu; Jinming Li
Journal:  Curr Microbiol       Date:  2010-10-24       Impact factor: 2.188

7.  Quantification of virus genes provides evidence for seed-bank populations of phycodnaviruses in Lake Ontario, Canada.

Authors:  Cindy M Short; Oksana Rusanova; Steven M Short
Journal:  ISME J       Date:  2010-12-02       Impact factor: 10.302

8.  Diversity and distribution of single-stranded DNA phages in the North Atlantic Ocean.

Authors:  Kimberly P Tucker; Rachel Parsons; Erin M Symonds; Mya Breitbart
Journal:  ISME J       Date:  2010-12-02       Impact factor: 10.302

9.  Metagenomic analysis of the viral communities in fermented foods.

Authors:  Eun-Jin Park; Kyoung-Ho Kim; Guy C J Abell; Min-Soo Kim; Seong Woon Roh; Jin-Woo Bae
Journal:  Appl Environ Microbiol       Date:  2010-12-23       Impact factor: 4.792

Review 10.  A new perspective on lysogeny: prophages as active regulatory switches of bacteria.

Authors:  Ron Feiner; Tal Argov; Lev Rabinovich; Nadejda Sigal; Ilya Borovok; Anat A Herskovits
Journal:  Nat Rev Microbiol       Date:  2015-10       Impact factor: 60.633

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