Literature DB >> 15930155

Positive selection for indel substitutions in the rodent sperm protein catsper1.

Ondrej Podlaha1, David M Webb, Priscilla K Tucker, Jianzhi Zhang.   

Abstract

Catsper1 is a voltage-gated calcium channel located in the plasma membrane of the sperm tail and is necessary for sperm motility and fertility in mice. We here examine the evolutionary pattern of Catsper1 from nine species of the rodent subfamily Murinae of family Muridae. We show that the rate of insertion/deletion (indel) substitutions in exon 1 of the gene is 4-15 times that in introns or neutral genomic regions, suggesting the presence of strong positive selection that promotes fixations of indel mutations in exon 1. The number of indel polymorphisms within species appears higher than expected from interspecific comparisons, although there are too little data to provide a statistically significant conclusion. These results, together with an earlier report in primates, indicate that positive selection promoting length variation in Catsper1 may be widespread in mammals. A structural model of Catsper1 suggested the importance of the exon 1-encoded region in regulating channel inactivation, which may affect sperm mobility and sperm competition. Our findings provide a necessary foundation for future experimental investigations of Catsper1's function in sperm physiology and role in sperm competition using rodent models.

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Year:  2005        PMID: 15930155      PMCID: PMC1351353          DOI: 10.1093/molbev/msi178

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  40 in total

1.  Rapid evolution of a primate sperm protein: relaxation of functional constraint or positive Darwinian selection?

Authors:  A P Rooney; J Zhang
Journal:  Mol Biol Evol       Date:  1999-05       Impact factor: 16.240

2.  Restoration of inactivation in mutants of Shaker potassium channels by a peptide derived from ShB.

Authors:  W N Zagotta; T Hoshi; R W Aldrich
Journal:  Science       Date:  1990-10-26       Impact factor: 47.728

3.  Biophysical and molecular mechanisms of Shaker potassium channel inactivation.

Authors:  T Hoshi; W N Zagotta; R W Aldrich
Journal:  Science       Date:  1990-10-26       Impact factor: 47.728

4.  Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites.

Authors:  Wendy S W Wong; Ziheng Yang; Nick Goldman; Rasmus Nielsen
Journal:  Genetics       Date:  2004-10       Impact factor: 4.562

5.  Diversifying selection of the tumor-growth promoter angiogenin in primate evolution.

Authors:  Jianzhi Zhang; Helene F Rosenberg
Journal:  Mol Biol Evol       Date:  2002-04       Impact factor: 16.240

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Rapid evolution of primate antiviral enzyme APOBEC3G.

Authors:  Jianzhi Zhang; David M Webb
Journal:  Hum Mol Genet       Date:  2004-06-15       Impact factor: 6.150

8.  Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection.

Authors:  A L Hughes; M Nei
Journal:  Nature       Date:  1988-09-08       Impact factor: 49.962

9.  Inactivation of the sodium channel. I. Sodium current experiments.

Authors:  F Bezanilla; C M Armstrong
Journal:  J Gen Physiol       Date:  1977-11       Impact factor: 4.086

10.  Identification of human and mouse CatSper3 and CatSper4 genes: characterisation of a common interaction domain and evidence for expression in testis.

Authors:  Anna Lobley; Valerie Pierron; Lindsey Reynolds; Liz Allen; David Michalovich
Journal:  Reprod Biol Endocrinol       Date:  2003-08-01       Impact factor: 5.211

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  25 in total

1.  Evolution of haploid selection in predominantly diploid organisms.

Authors:  Sarah P Otto; Michael F Scott; Simone Immler
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-15       Impact factor: 11.205

2.  Extraordinary sequence divergence at Tsga8, an X-linked gene involved in mouse spermiogenesis.

Authors:  Jeffrey M Good; Dan Vanderpool; Kimberly L Smith; Michael W Nachman
Journal:  Mol Biol Evol       Date:  2010-12-24       Impact factor: 16.240

3.  Positive selection on nucleotide substitutions and indels in accessory gland proteins of the Drosophila pseudoobscura subgroup.

Authors:  Sheri Dixon Schully; Michael E Hellberg
Journal:  J Mol Evol       Date:  2006-04-28       Impact factor: 2.395

4.  Molecular evolution of PKD2 gene family in mammals.

Authors:  Chun Ye; Huan Sun; Wenhu Guo; Yuquan Wei; Qin Zhou
Journal:  Genetica       Date:  2009-02-01       Impact factor: 1.082

5.  Is there selection for the pace of successive inactivation of the arpAT gene in primates?

Authors:  Ferran Casals; Anna Ferrer-Admetlla; Josep Chillarón; David Torrents; Manuel Palacín; Jaume Bertranpetit
Journal:  J Mol Evol       Date:  2008-06-20       Impact factor: 2.395

6.  Selection on length mutations after frameshift can explain the origin and retention of the AP3/DEF-like paralogues in Impatiens.

Authors:  Steven B Janssens; Tom Viaene; Suzy Huysmans; Erik F Smets; Koen P Geuten
Journal:  J Mol Evol       Date:  2008-04-08       Impact factor: 2.395

7.  High sensitivity to aligner and high rate of false positives in the estimates of positive selection in the 12 Drosophila genomes.

Authors:  Penka Markova-Raina; Dmitri Petrov
Journal:  Genome Res       Date:  2011-03-10       Impact factor: 9.043

8.  Positive selection neighboring functionally essential sites and disease-implicated regions of mammalian reproductive proteins.

Authors:  Claire C Morgan; Noeleen B Loughran; Thomas A Walsh; Alan J Harrison; Mary J O'Connell
Journal:  BMC Evol Biol       Date:  2010-02-11       Impact factor: 3.260

9.  Scanning for the signatures of positive selection for human-specific insertions and deletions.

Authors:  Chun-Hsi Chen; Trees-Juen Chuang; Ben-Yang Liao; Feng-Chi Chen
Journal:  Genome Biol Evol       Date:  2009-10-20       Impact factor: 3.416

Review 10.  K+ and Cl- channels and transporters in sperm function.

Authors:  C M Santi; G Orta; L Salkoff; P E Visconti; A Darszon; C L Treviño
Journal:  Curr Top Dev Biol       Date:  2013       Impact factor: 4.897

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