Literature DB >> 15929008

1H, 15N and 13C Resonance assignments and secondary structure determination reveal that the minimal Rac1 GTPase binding domain of plexin-B1 has a ubiquitin fold.

Yufeng Tong, Matthias Buck.   

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Year:  2005        PMID： 15929008      PMCID： PMC2782396          DOI： 10.1007/s10858-005-0943-9

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN： 0925-2738            Impact factor:   2.835


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  9 in total

1.  The semaphorin receptor plexin-B1 specifically interacts with active Rac in a ligand-dependent manner.

Authors:  H G Vikis; W Li; Z He; K L Guan
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

Review 2.  Semaphorin junction: making tracks toward neural connectivity.

Authors:  R Jeroen Pasterkamp; Alex L Kolodkin
Journal:  Curr Opin Neurobiol       Date:  2003-02       Impact factor: 6.627

3.  Reduced-dimensionality NMR spectroscopy for high-throughput protein resonance assignment.

Authors:  Thomas Szyperski; Deok C Yeh; Dinesh K Sukumaran; Hunter N B Moseley; Gaetano T Montelione
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

4.  When monomers are preferred: a strategy for the identification and disruption of weakly oligomerized proteins.

Authors:  Yufeng Tong; David Hughes; Lisa Placanica; Matthias Buck
Journal:  Structure       Date:  2005-01       Impact factor: 5.006

5.  Plexin-B semaphorin receptors interact directly with active Rac and regulate the actin cytoskeleton by activating Rho.

Authors:  M H Driessens; H Hu; C D Nobes; A Self; I Jordens; C S Goodman; A Hall
Journal:  Curr Biol       Date:  2001-03-06       Impact factor: 10.834

6.  Plexins are a large family of receptors for transmembrane, secreted, and GPI-anchored semaphorins in vertebrates.

Authors:  L Tamagnone; S Artigiani; H Chen; Z He; G I Ming; H Song; A Chedotal; M L Winberg; C S Goodman; M Poo; M Tessier-Lavigne; P M Comoglio
Journal:  Cell       Date:  1999-10-01       Impact factor: 41.582

7.  The plexin-B1/Rac interaction inhibits PAK activation and enhances Sema4D ligand binding.

Authors:  Haris G Vikis; Weiquan Li; Kun-Liang Guan
Journal:  Genes Dev       Date:  2002-04-01       Impact factor: 11.361

8.  Plexin B mediates axon guidance in Drosophila by simultaneously inhibiting active Rac and enhancing RhoA signaling.

Authors:  H Hu; T F Marton; C S Goodman
Journal:  Neuron       Date:  2001-10-11       Impact factor: 17.173

9.  The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data.

Authors:  D S Wishart; B D Sykes
Journal:  J Biomol NMR       Date:  1994-03       Impact factor: 2.835
  9 in total
  11 in total

1.  Binding of Rac1, Rnd1, and RhoD to a novel Rho GTPase interaction motif destabilizes dimerization of the plexin-B1 effector domain.

Authors:  Yufeng Tong; Preeti Chugha; Prasanta K Hota; Rebecca S Alviani; Mei Li; Wolfram Tempel; Limin Shen; Hee-Won Park; Matthias Buck
Journal:  J Biol Chem       Date:  2007-10-04       Impact factor: 5.157

2.  Compensatory and long-range changes in picosecond-nanosecond main-chain dynamics upon complex formation: 15N relaxation analysis of the free and bound states of the ubiquitin-like domain of human plexin-B1 and the small GTPase Rac1.

Authors:  S Bouguet-Bonnet; M Buck
Journal:  J Mol Biol       Date:  2008-02-04       Impact factor: 5.469

3.  Thermodynamic characterization of two homologous protein complexes: associations of the semaphorin receptor plexin-B1 RhoGTPase binding domain with Rnd1 and active Rac1.

Authors:  Prasanta K Hota; Matthias Buck
Journal:  Protein Sci       Date:  2009-05       Impact factor: 6.725

Review 4.  Plexin structures are coming: opportunities for multilevel investigations of semaphorin guidance receptors, their cell signaling mechanisms, and functions.

Authors:  Prasanta K Hota; Matthias Buck
Journal:  Cell Mol Life Sci       Date:  2012-06-29       Impact factor: 9.261

5.  Molecular Dynamics Simulations Reveal Isoform Specific Contact Dynamics between the Plexin Rho GTPase Binding Domain (RBD) and Small Rho GTPases Rac1 and Rnd1.

Authors:  Liqun Zhang; Matthias Buck
Journal:  J Phys Chem B       Date:  2017-02-08       Impact factor: 2.991

Review 6.  Diverse functions for the semaphorin receptor PlexinD1 in development and disease.

Authors:  Carl M Gay; Tomasz Zygmunt; Jesús Torres-Vázquez
Journal:  Dev Biol       Date:  2010-09-27       Impact factor: 3.582

7.  Insights into oncogenic mutations of plexin-B1 based on the solution structure of the Rho GTPase binding domain.

Authors:  Yufeng Tong; Prasanta K Hota; Mehdi Bagheri Hamaneh; Matthias Buck
Journal:  Structure       Date:  2008-02       Impact factor: 5.006

8.  Analysis of 15N-1H NMR relaxation in proteins by a combined experimental and molecular dynamics simulation approach: picosecond-nanosecond dynamics of the Rho GTPase binding domain of plexin-B1 in the dimeric state indicates allosteric pathways.

Authors:  Mirco Zerbetto; Ross Anderson; Sabine Bouguet-Bonnet; Mariano Rech; Liqun Zhang; Eva Meirovitch; Antonino Polimeno; Matthias Buck
Journal:  J Phys Chem B       Date:  2012-12-28       Impact factor: 2.991

9.  An activity-regulated microRNA, miR-188, controls dendritic plasticity and synaptic transmission by downregulating neuropilin-2.

Authors:  Kihwan Lee; Joung-Hun Kim; Oh-Bin Kwon; Kyongman An; Junghwa Ryu; Kwangwook Cho; Yoo-Hun Suh; Hye-Sun Kim
Journal:  J Neurosci       Date:  2012-04-18       Impact factor: 6.167

10.  Structure and dynamics analysis on plexin-B1 Rho GTPase binding domain as a monomer and dimer.

Authors:  Liqun Zhang; Thomas Centa; Matthias Buck
Journal:  J Phys Chem B       Date:  2014-06-25       Impact factor: 2.991
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