Literature DB >> 1592810

High information conservation implies that at least three proteins bind independently to F plasmid incD repeats.

N D Herman1, T D Schneider.   

Abstract

The 12 incD repeats in the F plasmid each contain about 60 bits of information, which is three times the amount of conservation that a single protein would need to distinguish the repeats from the rest of the Escherichia coli genome. This is the first reported discovery of a case of threefold excess information, and it implies that at least three proteins bind independently to the repeats. In support of this observation, other workers have shown that three polypeptides bind to this region, but only one, SopB, is known to bind independently of other factors. Identification of the other two proteins should help us to understand the mechanism of plasmid partitioning during cell division.

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Year:  1992        PMID: 1592810      PMCID: PMC206041          DOI: 10.1128/jb.174.11.3558-3560.1992

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  26 in total

1.  Analysis of the F plasmid centromere.

Authors:  D Lane; R Rothenbuehler; A M Merrillat; C Aiken
Journal:  Mol Gen Genet       Date:  1987-05

2.  The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library.

Authors:  Y Kohara; K Akiyama; K Isono
Journal:  Cell       Date:  1987-07-31       Impact factor: 41.582

3.  Gene organization in the region containing a new gene involved in chromosome partition in Escherichia coli.

Authors:  J Kato; Y Nishimura; M Yamada; H Suzuki; Y Hirota
Journal:  J Bacteriol       Date:  1988-09       Impact factor: 3.490

4.  Partitioning of the F plasmid: overproduction of an essential protein for partition inhibits plasmid maintenance.

Authors:  N Kusukawa; H Mori; A Kondo; S Hiraga
Journal:  Mol Gen Genet       Date:  1987-07

Review 5.  Plasmid partition.

Authors:  S J Austin
Journal:  Plasmid       Date:  1988-07       Impact factor: 3.466

6.  Nucleotide sequence of the ugp genes of Escherichia coli K-12: homology to the maltose system.

Authors:  P Overduin; W Boos; J Tommassen
Journal:  Mol Microbiol       Date:  1988-11       Impact factor: 3.501

Review 7.  Mechanisms that contribute to the stable segregation of plasmids.

Authors:  K Nordström; S J Austin
Journal:  Annu Rev Genet       Date:  1989       Impact factor: 16.830

8.  Structure and function of the F plasmid genes essential for partitioning.

Authors:  H Mori; A Kondo; A Ohshima; T Ogura; S Hiraga
Journal:  J Mol Biol       Date:  1986-11-05       Impact factor: 5.469

9.  Chromosomal genes essential for stable maintenance of the mini-F plasmid in Escherichia coli.

Authors:  H Niki; C Ichinose; T Ogura; H Mori; M Morita; M Hasegawa; N Kusukawa; S Hiraga
Journal:  J Bacteriol       Date:  1988-11       Impact factor: 3.490

10.  Possible involvement of the ugpA gene product in the stable maintenance of mini-F plasmid in Escherichia coli.

Authors:  B Ezaki; H Mori; T Ogura; S Hiraga
Journal:  Mol Gen Genet       Date:  1990-09
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  4 in total

1.  Evolution of biological information.

Authors:  T D Schneider
Journal:  Nucleic Acids Res       Date:  2000-07-15       Impact factor: 16.971

2.  Strong minor groove base conservation in sequence logos implies DNA distortion or base flipping during replication and transcription initiation.

Authors:  T D Schneider
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

3.  Twenty Years of Delila and Molecular Information Theory: The Altenberg-Austin Workshop in Theoretical Biology Biological Information, Beyond Metaphor: Causality, Explanation, and Unification Altenberg, Austria, 11-14 July 2002.

Authors:  Thomas D Schneider
Journal:  Biol Theory       Date:  2006

4.  Specific interaction of IHF with RIBs, a class of bacterial repetitive DNA elements located at the 3' end of transcription units.

Authors:  F Boccard; P Prentki
Journal:  EMBO J       Date:  1993-12-15       Impact factor: 11.598

  4 in total

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