| Literature DB >> 15927082 |
Mohammad Ali1, Jin-Kyung Park, Vu Dinh Thiem, Do Gia Canh, Michael Emch, John D Clemens.
Abstract
BACKGROUND: Spatial filtering using a geographic information system (GIS) is often used to smooth health and ecological data. Smoothing disease data can help us understand local (neighborhood) geographic variation and ecological risk of diseases. Analyses that use small neighborhood sizes yield individualistic patterns and large sizes reveal the global structure of data where local variation is obscured. Therefore, choosing an optimal neighborhood size is important for understanding ecological associations with diseases. This paper uses Hartley's test of homogeneity of variance (Fmax) as a methodological solution for selecting optimal neighborhood sizes. The data from a study area in Vietnam are used to test the suitability of this method.Entities:
Year: 2005 PMID: 15927082 PMCID: PMC1156930 DOI: 10.1186/1476-072X-4-12
Source DB: PubMed Journal: Int J Health Geogr ISSN: 1476-072X Impact factor: 3.918
Figure 1The geographic features of the study area in Vietnam. Map showing the geographic characteristics of the study area along with the geographic positing of the study area in Vietnam
Figure 2The data variance by neighborhood size. Graphical presentation of the data variances for the Vibro parahaemolyticus incidence in Khanh Hoa, Vietnam under various sizes of neighborhood.
Descriptive statistics and results of variance ratio (Fmax) test for the Vibrio parahaemolyticus incidence under various neighborhoods, Khanh Hoa Province, Vietnam, 1997–99. (n = 29,211)
| r † | Population size | Incidence Rate/10000 Population | Upper Fmax Test | Lower Fmax Test | |||||||||
| Min | Max | Mean | Min | Max | Mean | Variance | Fmax1 | DF1 * | CV1 ** | Fmax2 | DF2 * | CV2 ** | |
| 100 | 1 | 1779 | 158 | .00 | 1429.00 | 4.612 | 646.023 | 49.116 | 20 | 1.571 | 1.000 | 1 | 3.842 |
| 200 | 1 | 5143 | 492 | .00 | 370.40 | 4.451 | 195.453 | 14.860 | 19 | 1.587 | 2 | 2.996 | |
| 300 | 1 | 7372 | 914 | .00 | 208.30 | 4.538 | 108.599 | 8.257 | 18 | 1.604 | 5.949 | 3 | 2.605 |
| 400 | 1 | 9252 | 1416 | .00 | 161.30 | 4.533 | 73.509 | 5.589 | 17 | 1.623 | 8.788 | 4 | 2.372 |
| 3 | 12265 | 1971 | .00 | 144.90 | 4.494 | 52.889 | 4.021 | 16 | 1.644 | 12.215 | 5 | 2.214 | |
| 600 | 4 | 15784 | 2571 | .00 | 227.30 | 4.486 | 42.481 | 3.230 | 15 | 1.667 | 15.207 | 6 | 2.099 |
| 700 | 4 | 19178 | 3236 | .00 | 92.59 | 4.441 | 33.666 | 2.560 | 14 | 1.692 | 19.189 | 7 | 2.010 |
| 800 | 4 | 21949 | 3953 | .00 | 52.91 | 4.434 | 28.671 | 2.180 | 13 | 1.720 | 22.532 | 8 | 1.939 |
| 900 | 4 | 24982 | 4711 | .00 | 38.46 | 4.446 | 25.298 | 12 | 1.753 | 25.537 | 9 | 1.880 | |
| 1000 | 4 | 26772 | 5508 | .00 | 35.71 | 4.463 | 22.733 | 1.728 | 11 | 1.789 | 28.418 | 10 | 1.831 |
| 1100 | 6 | 28821 | 6324 | .00 | 36.50 | 4.4939 | 20.647 | 1.570 | 10 | 1.831 | 31.289 | 11 | 1.789 |
| 1200 | 25 | 31691 | 7160 | .00 | 36.50 | 4.5101 | 18.831 | 1.432 | 9 | 1.880 | 34.306 | 12 | 1.753 |
| 1300 | 50 | 34877 | 8029 | .00 | 46.51 | 4.5099 | 17.453 | 1.327 | 8 | 1.939 | 37.015 | 13 | 1.720 |
| 1400 | 63 | 36311 | 8921 | .00 | 37.17 | 4.5184 | 16.444 | 1.250 | 7 | 2.010 | 39.286 | 14 | 1.692 |
| 1500 | 63 | 37334 | 9832 | .00 | 31.65 | 4.5266 | 15.655 | 1.190 | 6 | 2.099 | 41.266 | 15 | 1.667 |
| 1600 | 63 | 38471 | 10760 | .00 | 28.33 | 4.5429 | 15.116 | 1.149 | 5 | 2.214 | 42.738 | 16 | 1.644 |
| 1700 | 63 | 39259 | 11693 | .00 | 28.17 | 4.5510 | 14.593 | 1.109 | 4 | 2.372 | 44.269 | 17 | 1.623 |
| 1800 | 63 | 40278 | 12651 | .00 | 27.70 | 4.5727 | 14.114 | 1.073 | 3 | 2.605 | 45.772 | 18 | 1.604 |
| 1900 | 63 | 41457 | 13657 | .00 | 26.32 | 4.5990 | 13.639 | 1.037 | 2 | 2.996 | 47.366 | 19 | 1.587 |
| 2000 | 63 | 42492 | 14703 | .00 | 26.32 | 4.6152 | 13.153 | 1.000 | 1 | 3.842 | 49.116 | 20 | 1.571 |
† r = size of neighborhood in meter radius
* DF = degrees of freedom
**CV1 and CV2 = critical values at 95% confidence level for Upper Fmax and Lower Fmax respectively Bold figures in Fmax1 and Fmax2 are the upper and lower limit of optimal neighborhoods, and the bold figure in "r" column is the choice of optimal neighborhood size.
Descriptive statistics and results of variance ratio (Fmax) test for the literacy status under various neighborhoods, Khanh Hoa Province, Vietnam, 2002. (n = 32,542)
| r † | Population size | Incidence Rate/10000 Population | Upper Fmax Test | Lower Fmax Test | |||||||||
| Min | Max | Mean | Min | Max | Mean | Variance | Fmax1 | DF1 * | CV1 ** | Fmax2 | DF2 * | CV2 ** | |
| 100 | 1 | 1859 | 195 | .00 | 100.00 | 50.226 | 221.986 | 3.262 | 20 | 1.571 | 1.000 | 1 | 3.842 |
| 200 | 1 | 5681 | 611 | .00 | 100.00 | 50.191 | 167.826 | 2.466 | 19 | 1.587 | 1.323 | 2 | 2.996 |
| 300 | 1 | 8362 | 1143 | .00 | 88.89 | 50.215 | 146.722 | 2.156 | 18 | 1.604 | 1.513 | 3 | 2.605 |
| 400 | 2 | 11276 | 1785 | .00 | 83.33 | 50.229 | 134.220 | 1.972 | 17 | 1.623 | 1.654 | 4 | 2.372 |
| 500 | 2 | 15425 | 2504 | .00 | 83.33 | 50.250 | 124.628 | 1.831 | 16 | 1.644 | 1.781 | 5 | 2.214 |
| 600 | 2 | 20047 | 3282 | .00 | 80.50 | 50.241 | 117.075 | 15 | 1.667 | 1.896 | 6 | 2.099 | |
| 2 | 23875 | 4146 | .00 | 80.52 | 50.270 | 110.223 | 1.620 | 14 | 1.692 | 7 | 2.010 | ||
| 800 | 2 | 28601 | 5075 | .00 | 80.46 | 50.296 | 104.018 | 1.528 | 13 | 1.720 | 2.134 | 8 | 1.939 |
| 900 | 2 | 33159 | 6055 | .00 | 80.14 | 50.318 | 98.808 | 1.452 | 12 | 1.752 | 2.247 | 9 | 1.880 |
| 1000 | 4 | 36182 | 7081 | 15.70 | 75.96 | 50.333 | 94.737 | 1.392 | 11 | 1.789 | 2.343 | 10 | 1.831 |
| 1100 | 9 | 39576 | 8129 | 11.11 | 74.55 | 50.344 | 91.235 | 1.341 | 10 | 1.831 | 2.433 | 11 | 1.789 |
| 1200 | 25 | 43628 | 9194 | 15.97 | 73.14 | 50.355 | 88.216 | 1.296 | 9 | 1.880 | 2.516 | 12 | 1.752 |
| 1300 | 25 | 47769 | 10297 | 16.07 | 72.95 | 50.373 | 85.460 | 1.256 | 8 | 1.939 | 2.598 | 13 | 1.720 |
| 1400 | 25 | 49747 | 11427 | 16.52 | 72.44 | 50.386 | 82.739 | 1.216 | 7 | 2.010 | 2.683 | 14 | 1.692 |
| 1500 | 25 | 51108 | 12580 | 16.54 | 71.57 | 50.390 | 80.180 | 1.178 | 6 | 2.099 | 2.769 | 15 | 1.667 |
| 1600 | 66 | 52454 | 13750 | 16.54 | 70.89 | 50.394 | 77.521 | 1.139 | 5 | 2.214 | 2.864 | 16 | 1.644 |
| 1700 | 128 | 53725 | 14925 | 16.61 | 70.67 | 50.392 | 74.995 | 1.102 | 4 | 2.372 | 2.960 | 17 | 1.623 |
| 1800 | 138 | 55422 | 16133 | 16.61 | 69.93 | 50.393 | 72.569 | 1.066 | 3 | 2.605 | 3.059 | 18 | 1.604 |
| 1900 | 138 | 57913 | 17398 | 17.36 | 69.52 | 50.394 | 70.210 | 1.032 | 2 | 2.996 | 3.162 | 19 | 1.587 |
| 2000 | 148 | 59428 | 18708 | 17.75 | 68.81 | 50.412 | 68.054 | 1.000 | 1 | 3.842 | 3.262 | 20 | 1.571 |
† r = size of neighborhood in meter radius
* DF = degrees of freedom
**CV1 and CV2 = critical values at 95% confidence level for Upper Fmax and Lower Fmax respectively Bold figures in Fmax1 and Fmax2 are the upper and lower limit of optimal neighborhoods, and the bold figure in "r" column is the choice of optimal neighborhood size.
Descriptive statistics and results of variance ratio (Fmax) test for the ethnicity status under various neighborhoods, Khanh Hoa Province, Vietnam, 2002. (n = 32,542)
| r † | Population size | Incidence Rate/10000 Population | Upper Fmax Test | Lower Fmax Test | |||||||||
| Min | Max | Mean | Min | Max | Mean | Variance | Fmax1 | DF1 * | CV1 ** | Fmax2 | DF2 * | CV2 ** | |
| 100 | 1 | 1859 | 195 | .00 | 100.00 | 7.283 | 243.304 | 4.026 | 20 | 1.571 | 1.000 | 1 | 3.842 |
| 200 | 1 | 5681 | 611 | .00 | 100.00 | 7.344 | 183.209 | 3.032 | 19 | 1.587 | 1.328 | 2 | 2.996 |
| 300 | 1 | 8362 | 1143 | .00 | 100.00 | 7.383 | 153.024 | 2.532 | 18 | 1.604 | 1.590 | 3 | 2.605 |
| 400 | 2 | 11276 | 1785 | .00 | 100.00 | 7.402 | 133.603 | 2.211 | 17 | 1.623 | 1.821 | 4 | 2.372 |
| 500 | 2 | 15425 | 2504 | .00 | 100.00 | 7.467 | 121.327 | 2.008 | 16 | 1.644 | 2.005 | 5 | 2.214 |
| 600 | 2 | 20047 | 3282 | .00 | 88.57 | 7.534 | 112.520 | 1.862 | 15 | 1.667 | 6 | 2.099 | |
| 2 | 23875 | 4146 | .00 | 88.57 | 7.609 | 105.353 | 14 | 1.692 | 2.309 | 7 | 2.010 | ||
| 800 | 2 | 28601 | 5075 | .00 | 82.50 | 7.682 | 99.320 | 1.644 | 13 | 1.720 | 2.450 | 8 | 1.939 |
| 900 | 2 | 33159 | 6055 | .00 | 75.00 | 7.719 | 93.729 | 1.551 | 12 | 1.752 | 2.596 | 9 | 1.880 |
| 1000 | 4 | 36182 | 7081 | .00 | 69.49 | 7.745 | 88.828 | 1.470 | 11 | 1.789 | 2.739 | 10 | 1.831 |
| 1100 | 9 | 39576 | 8129 | .00 | 63.73 | 7.761 | 84.867 | 1.404 | 10 | 1.831 | 2.867 | 11 | 1.789 |
| 1200 | 25 | 43628 | 9194 | .00 | 62.40 | 7.776 | 81.459 | 1.348 | 9 | 1.880 | 2.987 | 12 | 1.752 |
| 1300 | 25 | 47769 | 10297 | .00 | 62.40 | 7.793 | 78.140 | 1.293 | 8 | 1.939 | 3.114 | 13 | 1.720 |
| 1400 | 25 | 49747 | 11427 | .00 | 61.91 | 7.801 | 74.610 | 1.235 | 7 | 2.010 | 3.261 | 14 | 1.692 |
| 1500 | 25 | 51108 | 12580 | .00 | 60.84 | 7.820 | 71.456 | 1.183 | 6 | 2.099 | 3.405 | 15 | 1.667 |
| 1600 | 66 | 52454 | 13750 | .00 | 58.06 | 7.851 | 69.027 | 1.142 | 5 | 2.214 | 3.525 | 16 | 1.644 |
| 1700 | 128 | 53725 | 14925 | .00 | 50.55 | 7.873 | 66.823 | 1.106 | 4 | 2.372 | 3.641 | 17 | 1.623 |
| 1800 | 138 | 55422 | 16133 | .00 | 46.79 | 7.891 | 64.531 | 1.068 | 3 | 2.605 | 3.770 | 18 | 1.604 |
| 1900 | 138 | 57913 | 17398 | .00 | 44.54 | 7.907 | 62.339 | 1.032 | 2 | 2.996 | 3.903 | 19 | 1.587 |
| 2000 | 148 | 59428 | 18708 | .00 | 39.71 | 7.915 | 60.426 | 1.000 | 1 | 3.842 | 4.026 | 20 | 1.571 |
† r = size of neighborhood in meter radius
* DF = degrees of freedom
**CV1 and CV2 = critical values at 95% confidence level for Upper Fmax and Lower Fmax respectively Bold figures in Fmax1 and Fmax2 are the upper and lower limit of optimal neighborhoods, and the bold figure in "r" column is the choice of optimal neighborhood size.
Descriptive statistics and results of variance ratio (Fmax) test for shigella incidence under various neighborhoods, Nha Trang, Vietnam, 1999–2001. (n = 13565)
| r † | Population size | Incidence Rate/10000 Population | Upper Fmax Test | Lower Fmax Test | |||||||||
| Min | Max | Mean | Min | Max | Mean | Variance | Fmax1 | DF1 * | CV1 ** | Fmax2 | DF2 * | CV2 ** | |
| 100 | 3 | 5692 | 1015 | .00 | 333.30 | 6.041 | 197.436 | 25.397 | 20 | 1.571 | 1.000 | 1 | 3.842 |
| 200 | 3 | 17440 | 3223 | .00 | 333.30 | 6.155 | 74.927 | 9.638 | 19 | 1.587 | 2.635 | 2 | 2.996 |
| 300 | 3 | 25689 | 6026 | .00 | 57.14 | 6.112 | 38.808 | 4.992 | 18 | 1.605 | 3 | 2.606 | |
| 10 | 34531 | 9388 | .00 | 41.67 | 6.116 | 28.304 | 3.641 | 17 | 1.624 | 6.976 | 4 | 2.373 | |
| 500 | 30 | 47539 | 13112 | .00 | 57.47 | 6.102 | 22.808 | 2.934 | 16 | 1.644 | 8.656 | 5 | 2.215 |
| 600 | 33 | 61692 | 17105 | .00 | 34.36 | 6.121 | 18.871 | 2.427 | 15 | 1.667 | 10.462 | 6 | 2.099 |
| 700 | 33 | 73490 | 21480 | .00 | 35.46 | 6.129 | 16.566 | 2.131 | 14 | 1.692 | 11.918 | 7 | 2.010 |
| 800 | 87 | 88015 | 26126 | .00 | 27.47 | 6.140 | 14.514 | 13 | 1.721 | 13.603 | 8 | 1.939 | |
| 900 | 87 | 102106 | 30938 | .00 | 22.87 | 6.148 | 13.374 | 1.720 | 12 | 1.753 | 14.763 | 9 | 1.881 |
| 1000 | 87 | 111244 | 35834 | .00 | 31.15 | 6.158 | 12.651 | 1.627 | 11 | 1.789 | 15.606 | 10 | 1.831 |
| 1100 | 87 | 121667 | 40711 | .00 | 19.67 | 6.137 | 11.774 | 1.515 | 10 | 1.831 | 16.769 | 11 | 1.789 |
| 1200 | 150 | 134222 | 45547 | .00 | 18.28 | 6.116 | 11.057 | 1.422 | 9 | 1.881 | 17.856 | 12 | 1.753 |
| 1300 | 425 | 146883 | 50410 | .00 | 17.64 | 6.119 | 10.536 | 1.355 | 8 | 1.939 | 18.739 | 13 | 1.721 |
| 1400 | 628 | 152901 | 55270 | .00 | 16.40 | 6.135 | 10.079 | 1.297 | 7 | 2.010 | 19.589 | 14 | 1.692 |
| 1500 | 628 | 156963 | 60090 | 1.21 | 15.92 | 6.135 | 9.588 | 1.233 | 6 | 2.099 | 20.592 | 15 | 1.667 |
| 1600 | 628 | 161121 | 64829 | 1.77 | 15.92 | 6.123 | 9.104 | 1.171 | 5 | 2.215 | 21.687 | 16 | 1.644 |
| 1700 | 628 | 165020 | 69457 | 1.21 | 15.92 | 6.129 | 8.751 | 1.126 | 4 | 2.373 | 22.562 | 17 | 1.624 |
| 1800 | 628 | 170190 | 74078 | 2.73 | 15.92 | 6.135 | 8.411 | 1.082 | 3 | 2.606 | 23.474 | 18 | 1.605 |
| 1900 | 628 | 177965 | 78890 | 2.68 | 15.92 | 6.153 | 8.099 | 1.042 | 2 | 2.996 | 24.378 | 19 | 1.587 |
| 2000 | 628 | 182551 | 83821 | 2.98 | 15.92 | 6.171 | 7.774 | 1.000 | 1 | 3.842 | 25.397 | 20 | 1.571 |
† r = size of neighborhood in meter radius
* DF = degrees of freedom
**CV1 and CV2 = critical values at 95% confidence level for Upper Fmax and Lower Fmax respectively Bold figures in Fmax1 and Fmax2 are the upper and lower limit of optimal neighborhoods, and the bold figure in "r" column is the choice of optimal neighborhood size.
Figure 3Local geographic pattern of . The map was created based on the household point locations, thus the upper part of the study where no households are located have been omitted during the creation of the surface map. The lighter tones indicate lower Vibro parahaemolyticus incidence rate and the darker tones indicate higher Vibro parahaemolyticus incidence rate.
Figure 4Local geographic pattern of literacy status in Khanh Hoa province, Vietnam. The map was created based on the household point locations, thus the upper part of the study where no households are located have been omitted during the creation of the surface map. The lighter tones indicate lower literacy status and the darker tones indicate higher literacy status.
Figure 5Local geographic pattern of ethnicity status in Khanh Hoa province, Vietnam. The map was created based on the household point locations, thus the upper part of the study where no households are located have been omitted during the creation of the surface map. The lighter tones indicate lower proportion of ethnically minority group and the darker tones indicate higher proportion of the ethnically minority group.
Figure 6Local geographic pattern of shigella incidence rate in Nha Trang, Vietnam. The map was created based on the household point locations, thus the upper part of the study where no households are located have been omitted during the creation of the surface map. The lighter tones indicate lower shigella incidence rate and the darker tones indicate higher shigella incidence rate.