Literature DB >> 15925004

Selection of hypervariable microsatellite loci for the characterization of Saccharomyces cerevisiae strains.

Jean-Luc Legras1, Olivier Ruh, Didier Merdinoglu, Francis Karst.   

Abstract

A survey of the genetic polyphormism that can be detected at different microsatellite loci in Saccharomyces cerevisiae strains was performed in order to develop an efficient microsatellite based typing technique. Using gel electrophoresis, we analyzed 41 microsatellite loci for 10 strains and observed that 29 loci displayed significant polymorphism. The measurement of the PCR amplicon size of 21 loci for 46 strains by capillary electrophoresis, allowed us to retain the six most variable sites for S. cerevisiae typing from which three were described for the first time. The resulting combination of these six loci provides a highly discriminant and reproducible technique that also reveals relationships between strains, especially those of particular geographical (or technological) origins. These polymorphic loci can easily be used for PCR profiling of S. cerevisiae strains during fermentation.

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Year:  2005        PMID: 15925004     DOI: 10.1016/j.ijfoodmicro.2004.12.007

Source DB:  PubMed          Journal:  Int J Food Microbiol        ISSN: 0168-1605            Impact factor:   5.277


  27 in total

1.  SaccharomycesIDentifier, SID: strain-level analysis of Saccharomyces cerevisiae populations by using microsatellite meta-patterns.

Authors:  Irene Stefanini; Davide Albanese; Maddalena Sordo; Jean-Luc Legras; Carlotta De Filippo; Duccio Cavalieri; Claudio Donati
Journal:  Sci Rep       Date:  2017-11-10       Impact factor: 4.379

2.  Ecological success of a group of Saccharomyces cerevisiae/Saccharomyces kudriavzevii hybrids in the northern european wine-making environment.

Authors:  C Erny; P Raoult; A Alais; G Butterlin; P Delobel; F Matei-Radoi; S Casaregola; J L Legras
Journal:  Appl Environ Microbiol       Date:  2012-02-17       Impact factor: 4.792

3.  Effect of sulfite addition and pied de cuve inoculation on the microbial communities and sensory profiles of Chardonnay wines: dominance of indigenous Saccharomyces uvarum at a commercial winery.

Authors:  Sydney C Morgan; Garrett C McCarthy; Brittany S Watters; Mansak Tantikachornkiat; Ieva Zigg; Margaret A Cliff; Daniel M Durall
Journal:  FEMS Yeast Res       Date:  2019-08-01       Impact factor: 2.796

4.  Cellar-Associated Saccharomyces cerevisiae Population Structure Revealed High-Level Diversity and Perennial Persistence at Sauternes Wine Estates.

Authors:  Marine Börlin; Pauline Venet; Olivier Claisse; Franck Salin; Jean-Luc Legras; Isabelle Masneuf-Pomarede
Journal:  Appl Environ Microbiol       Date:  2016-05-02       Impact factor: 4.792

5.  Molecular relationships between Saccharomyces cerevisiae strains involved in winemaking from Mendoza, Argentina.

Authors:  Laura Mercado; Sandra Jubany; Carina Gaggero; Ricardo W Masuelli; Mariana Combina
Journal:  Curr Microbiol       Date:  2010-04-21       Impact factor: 2.188

6.  Role of social wasps in Saccharomyces cerevisiae ecology and evolution.

Authors:  Irene Stefanini; Leonardo Dapporto; Jean-Luc Legras; Antonio Calabretta; Monica Di Paola; Carlotta De Filippo; Roberto Viola; Paolo Capretti; Mario Polsinelli; Stefano Turillazzi; Duccio Cavalieri
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-30       Impact factor: 11.205

7.  Microsatellite analysis of genetic diversity among clinical and nonclinical Saccharomyces cerevisiae isolates suggests heterozygote advantage in clinical environments.

Authors:  Ludo A H Muller; John H McCusker
Journal:  Mol Ecol       Date:  2009-05-20       Impact factor: 6.185

8.  Biogeographical characterization of Saccharomyces cerevisiae wine yeast by molecular methods.

Authors:  Rosanna Tofalo; Giorgia Perpetuini; Maria Schirone; Giuseppe Fasoli; Irene Aguzzi; Aldo Corsetti; Giovanna Suzzi
Journal:  Front Microbiol       Date:  2013-06-24       Impact factor: 5.640

9.  Genetic diversity and population structure of Saccharomyces cerevisiae strains isolated from different grape varieties and winemaking regions.

Authors:  Dorit Schuller; Filipa Cardoso; Susana Sousa; Paula Gomes; Ana C Gomes; Manuel A S Santos; Margarida Casal
Journal:  PLoS One       Date:  2012-02-29       Impact factor: 3.240

10.  Analysis of the Saccharomyces cerevisiae pan-genome reveals a pool of copy number variants distributed in diverse yeast strains from differing industrial environments.

Authors:  Barbara Dunn; Chandra Richter; Daniel J Kvitek; Tom Pugh; Gavin Sherlock
Journal:  Genome Res       Date:  2012-02-27       Impact factor: 9.043

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