Literature DB >> 15922025

A computational model of the ribbon synapse.

Michael A Sikora1, Jon Gottesman, Robert F Miller.   

Abstract

A model of the ribbon synapse was developed to replicate both pre- and postsynaptic functions of this glutamatergic juncture. The presynaptic portion of the model is rich in anatomical and physiological detail and includes multiple release sites for each ribbon based on anatomical studies of presynaptic terminals, presynaptic voltage at the terminal, the activation of voltage-gated calcium channels and a calcium-dependent release mechanism whose rate varies as a function of the calcium concentration that is monitored at two different sites which control both an ultrafast, docked pool of vesicles and a release ready pool of tethered vesicles. The postsynaptic portion of the program models diffusion of glutamate and the physiological properties of glutamatergic neurotransmission in target cells. We demonstrate the behavior of the model using the retinal bipolar cell to ganglion cell ribbon synapse. The model was constrained by the anatomy of salamander bipolar terminals based on the ultrastructure of these synapses and presynaptic contacts were placed onto realistic ganglion cell morphology activated by a range of ribbon synapses (46-138). These inputs could excite the cell in a manner consistent with physiological observations. This model is a comprehensive, first-generation attempt to assemble our present understanding of the ribbon synapse into a domain that permits testing our understanding of this important structure. We believe that with minor modifications of this model, it can be fine tuned for other ribbon synapses.

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Year:  2005        PMID: 15922025     DOI: 10.1016/j.jneumeth.2004.11.023

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  8 in total

1.  Ionic mechanisms underlying tonic and phasic firing behaviors in retinal ganglion cells: a model study.

Authors:  Lei Wang; Pei-Ji Liang; Pu-Ming Zhang; Yi-Hong Qiu
Journal:  Channels (Austin)       Date:  2014       Impact factor: 2.581

2.  Modelling intrinsic electrophysiological properties of ON and OFF retinal ganglion cells.

Authors:  Tatiana Kameneva; Hamish Meffin; Anthony N Burkitt
Journal:  J Comput Neurosci       Date:  2011-03-23       Impact factor: 1.621

3.  Amperometric resolution of a prespike stammer and evoked phases of fast release from retinal bipolar cells.

Authors:  Chad P Grabner; David Zenisek
Journal:  J Neurosci       Date:  2013-05-08       Impact factor: 6.167

4.  Increasing Electrical Stimulation Efficacy in Degenerated Retina: Stimulus Waveform Design in a Multiscale Computational Model.

Authors:  Kyle Loizos; Robert Marc; Mark Humayun; James R Anderson; Bryan W Jones; Gianluca Lazzi
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2018-06       Impact factor: 3.802

5.  The mossy fiber bouton: the "common" or the "unique" synapse?

Authors:  Astrid Rollenhagen; Joachim H R Lübke
Journal:  Front Synaptic Neurosci       Date:  2010-03-15

6.  Model-based comparison of current flow in rod bipolar cells of healthy and early-stage degenerated retina.

Authors:  Pragya Kosta; Ege Iseri; Kyle Loizos; Javad Paknahad; Rebecca L Pfeiffer; Crystal L Sigulinsky; James R Anderson; Bryan W Jones; Gianluca Lazzi
Journal:  Exp Eye Res       Date:  2021-03-30       Impact factor: 3.770

7.  A computational study on the role of gap junctions and rod Ih conductance in the enhancement of the dynamic range of the retina.

Authors:  Rodrigo Publio; Rodrigo F Oliveira; Antonio C Roque
Journal:  PLoS One       Date:  2009-09-24       Impact factor: 3.240

8.  Hair cell-type dependent expression of basolateral ion channels shapes response dynamics in the frog utricle.

Authors:  Alessandro Venturino; Adriano Oda; Paola Perin
Journal:  Front Cell Neurosci       Date:  2015-09-07       Impact factor: 5.505

  8 in total

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