Literature DB >> 15917230

Bishistidyl heme hexacoordination, a key structural property in Drosophila melanogaster hemoglobin.

Daniele de Sanctis1, Sylvia Dewilde, Clemens Vonrhein, Alessandra Pesce, Luc Moens, Paolo Ascenzi, Thomas Hankeln, Thorsten Burmester, Marco Ponassi, Marco Nardini, Martino Bolognesi.   

Abstract

Hemoglobins at high concentration have been isolated long ago from some insect larvae living in hypoxic environments. Conversely, a monomeric hemoglobin has been discovered recently in the fruit fly Drosophila melanogaster as intracellular protein expressed both in larvae and in the adult fly. Such a finding indicates that the oxygen supply in insects may be more complex than previously thought, relying not only on O2 diffusion through the tubular tracheal system, but also on carrier-mediated transport and storage. We present here the crystal structure of recombinant D. melanogaster hemoglobin at 1.20 A resolution. Spectroscopic data show that the protein displays a hexacoordinated heme, whose axial ligands are the proximal and distal His residues. Such bis-His ligation of the heme has sizable effects on the protein local structure. Three protein matrix cavities, comparable in size but not in topological locations with those of sperm whale myoglobin, are spread through the protein matrix; one of these can host a xenon atom. Additionally, D. melanogaster hemoglobin binds one molecule of 3-(cyclohexylamino)propanesulfonic acid (CAPS) buffer at a surface pocket, next to the EF hinge. Despite the high resolution achieved, no sequence/structure features specifically supporting the heme hexa- to pentacoordination transition required for diatomic ligand binding could be recognized.

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Year:  2005        PMID: 15917230     DOI: 10.1074/jbc.M503814200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  12 in total

Review 1.  Structure and reactivity of hexacoordinate hemoglobins.

Authors:  Smita Kakar; Federico G Hoffman; Jay F Storz; Marian Fabian; Mark S Hargrove
Journal:  Biophys Chem       Date:  2010-09-21       Impact factor: 2.352

2.  Five-coordinate H64Q neuroglobin as a ligand-trap antidote for carbon monoxide poisoning.

Authors:  Ivan Azarov; Ling Wang; Jason J Rose; Qinzi Xu; Xueyin N Huang; Andrea Belanger; Ying Wang; Lanping Guo; Chen Liu; Kamil B Ucer; Charles F McTiernan; Christopher P O'Donnell; Sruti Shiva; Jesús Tejero; Daniel B Kim-Shapiro; Mark T Gladwin
Journal:  Sci Transl Med       Date:  2016-12-07       Impact factor: 17.956

3.  Proximal influences in two-on-two globins: effect of the Ala69Ser replacement on Synechocystis sp. PCC 6803 hemoglobin.

Authors:  Jane A Knappenberger; Syna A Kuriakose; B Christie Vu; Henry J Nothnagel; David A Vuletich; Juliette T J Lecomte
Journal:  Biochemistry       Date:  2006-09-26       Impact factor: 3.162

4.  Solution 1H NMR characterization of the axial bonding of the two His in oxidized human cytoglobin.

Authors:  Vasyl Bondarenko; Sylvia Dewilde; Luc Moens; Gerd N La Mar
Journal:  J Am Chem Soc       Date:  2006-10-04       Impact factor: 15.419

5.  Modulation of oxygen binding to insect hemoglobins: the structure of hemoglobin from the botfly Gasterophilus intestinalis.

Authors:  Alessandra Pesce; Marco Nardini; Sylvia Dewilde; David Hoogewijs; Paolo Ascenzi; Luc Moens; Martino Bolognesi
Journal:  Protein Sci       Date:  2005-10-31       Impact factor: 6.725

6.  Chemical reactivity of Synechococcus sp. PCC 7002 and Synechocystis sp. PCC 6803 hemoglobins: covalent heme attachment and bishistidine coordination.

Authors:  Henry J Nothnagel; Matthew R Preimesberger; Matthew P Pond; Benjamin Y Winer; Emily M Adney; Juliette T J Lecomte
Journal:  J Biol Inorg Chem       Date:  2011-01-15       Impact factor: 3.358

7.  Structural characterization of ferric hemoglobins from three antarctic fish species of the suborder notothenioidei.

Authors:  Alessandro Vergara; Marisa Franzese; Antonello Merlino; Luigi Vitagliano; Cinzia Verde; Guido di Prisco; H Caroline Lee; Jack Peisach; Lelio Mazzarella
Journal:  Biophys J       Date:  2007-06-01       Impact factor: 4.033

8.  Testes-specific hemoglobins in Drosophila evolved by a combination of sub- and neofunctionalization after gene duplication.

Authors:  Eva Gleixner; Holger Herlyn; Stefan Zimmerling; Thorsten Burmester; Thomas Hankeln
Journal:  BMC Evol Biol       Date:  2012-03-19       Impact factor: 3.260

9.  Open and Lys-His Hexacoordinated Closed Structures of a Globin with Swapped Proximal and Distal Sites.

Authors:  Aik-Hong Teh; Jennifer A Saito; Nazalan Najimudin; Maqsudul Alam
Journal:  Sci Rep       Date:  2015-06-22       Impact factor: 4.379

10.  Isoniazid inhibits the heme-based reactivity of Mycobacterium tuberculosis truncated hemoglobin N.

Authors:  Paolo Ascenzi; Andrea Coletta; Yu Cao; Viviana Trezza; Loris Leboffe; Gabriella Fanali; Mauro Fasano; Alessandra Pesce; Chiara Ciaccio; Stefano Marini; Massimo Coletta
Journal:  PLoS One       Date:  2013-08-01       Impact factor: 3.240

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