Literature DB >> 15911578

Extending Xu's Bayesian model for estimating polygenic effects using markers of the entire genome.

Cajo J F ter Braak1, Martin P Boer, Marco C A M Bink.   

Abstract

In 2003, Xu obtained remarkably precise estimates of QTL positions despite the many markers simultaneously in his Bayesian model. We extend his model and Gibbs algorithm to ensure a valid posterior distribution and convergence to it, without changing the attractiveness of the method.

Mesh：

Year:  2005        PMID： 15911578      PMCID： PMC1451196          DOI： 10.1534/genetics.105.040469

Source DB:  PubMed          Journal:  Genetics        ISSN： 0016-6731            Impact factor:   4.562


  3 in total

1.  Prediction of total genetic value using genome-wide dense marker maps.

Authors:  T H Meuwissen; B J Hayes; M E Goddard
Journal:  Genetics       Date:  2001-04       Impact factor: 4.562

2.  Statistical methods for mapping quantitative trait loci from a dense set of markers.

Authors:  J Dupuis; D Siegmund
Journal:  Genetics       Date:  1999-01       Impact factor: 4.562

3.  Estimating polygenic effects using markers of the entire genome.

Authors:  Shizhong Xu
Journal:  Genetics       Date:  2003-02       Impact factor: 4.562
  3 in total
  30 in total

1.  Accuracy of genomic selection in European maize elite breeding populations.

Authors:  Yusheng Zhao; Manje Gowda; Wenxin Liu; Tobias Würschum; Hans P Maurer; Friedrich H Longin; Nicolas Ranc; Jochen C Reif
Journal:  Theor Appl Genet       Date:  2011-11-11       Impact factor: 5.699

2.  Improved LASSO priors for shrinkage quantitative trait loci mapping.

Authors:  Ming Fang; Dan Jiang; Dandan Li; Runqing Yang; Weixuan Fu; Lijun Pu; Huijiang Gao; Guihua Wang; Liyun Yu
Journal:  Theor Appl Genet       Date:  2012-05       Impact factor: 5.699

3.  Mapping environment-specific quantitative trait loci.

Authors:  Xin Chen; Fuping Zhao; Shizhong Xu
Journal:  Genetics       Date:  2010-08-30       Impact factor: 4.562

4.  The impact of genetic architecture on genome-wide evaluation methods.

Authors:  Hans D Daetwyler; Ricardo Pong-Wong; Beatriz Villanueva; John A Woolliams
Journal:  Genetics       Date:  2010-04-20       Impact factor: 4.562

5.  Genomic-assisted prediction of genetic value with semiparametric procedures.

Authors:  Daniel Gianola; Rohan L Fernando; Alessandra Stella
Journal:  Genetics       Date:  2006-04-28       Impact factor: 4.562

6.  Quantitative trait loci for the circadian clock in Neurospora crassa.

Authors:  Tae-Sung Kim; Benjamin A Logsdon; Sohyun Park; Jason G Mezey; Kwangwon Lee
Journal:  Genetics       Date:  2007-10-18       Impact factor: 4.562

7.  Using quantitative trait loci results to discriminate among crosses on the basis of their progeny mean and variance.

Authors:  Shengqiang Zhong; Jean-Luc Jannink
Journal:  Genetics       Date:  2007-07-29       Impact factor: 4.562

8.  Mapping quantitative trait loci from a single-tail sample of the phenotype distribution including survival data.

Authors:  Mikko J Sillanpää; Fabian Hoti
Journal:  Genetics       Date:  2007-12       Impact factor: 4.562

Review 9.  Methodologies for segregation analysis and QTL mapping in plants.

Authors:  Yuan-Ming Zhang; Junyi Gai
Journal:  Genetica       Date:  2008-08-23       Impact factor: 1.082

10.  Factors affecting accuracy from genomic selection in populations derived from multiple inbred lines: a Barley case study.

Authors:  Shengqiang Zhong; Jack C M Dekkers; Rohan L Fernando; Jean-Luc Jannink
Journal:  Genetics       Date:  2009-03-18       Impact factor: 4.562
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