Literature DB >> 15908579

Computational model for cell migration in three-dimensional matrices.

Muhammad H Zaman1, Roger D Kamm, Paul Matsudaira, Douglas A Lauffenburger.   

Abstract

Although computational models for cell migration on two-dimensional (2D) substrata have described how various molecular and cellular properties and physiochemical processes are integrated to accomplish cell locomotion, the same issues, along with certain new ones, might contribute differently to a model for migration within three-dimensional (3D) matrices. To address this more complicated situation, we have developed a computational model for cell migration in 3D matrices using a force-based dynamics approach. This model determines an overall locomotion velocity vector, comprising speed and direction, for individual cells based on internally generated forces transmitted into external traction forces and considering a timescale during which multiple attachment and detachment events are integrated. Key parameters characterize cell and matrix properties, including cell/matrix adhesion and mechanical and steric properties of the matrix; critical underlying molecular properties are incorporated explicitly or implicitly. Model predictions agree well with experimental results for the limiting case of migration on 2D substrata as well as with recent experiments in 3D natural tissues and synthetic gels. Certain predicted features such as biphasic behavior of speed with density of matrix ligands for 3D migration are qualitatively similar to their 2D counterparts, but new effects generally absent in 2D systems, such as effects due to matrix sterics and mechanics, are now predicted to arise in many 3D situations. As one particular sample manifestation of these effects, the optimal levels of cell receptor expression and matrix ligand density yielding maximal migration are dependent on matrix mechanical compliance.

Mesh:

Year:  2005        PMID: 15908579      PMCID: PMC1366623          DOI: 10.1529/biophysj.105.060723

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  38 in total

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Journal:  Cell Mol Life Sci       Date:  2000-01-20       Impact factor: 9.261

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Authors:  S Munevar; Y L Wang; M Dembo
Journal:  Mol Biol Cell       Date:  2001-12       Impact factor: 4.138

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Journal:  J Math Biol       Date:  1996       Impact factor: 2.259

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Journal:  J Biol Chem       Date:  1985-10-25       Impact factor: 5.157

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Journal:  J Biol Chem       Date:  1985-04-10       Impact factor: 5.157

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Authors:  E Cukierman; R Pankov; D R Stevens; K M Yamada
Journal:  Science       Date:  2001-11-23       Impact factor: 47.728

7.  Requirement of receptor-bound urokinase-type plasminogen activator for integrin alphavbeta5-directed cell migration.

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Journal:  J Biol Chem       Date:  1996-11-15       Impact factor: 5.157

8.  A stochastic model for leukocyte random motility and chemotaxis based on receptor binding fluctuations.

Authors:  R T Tranquillo; D A Lauffenburger; S H Zigmond
Journal:  J Cell Biol       Date:  1988-02       Impact factor: 10.539

9.  The E8 subfragment of laminin promotes locomotion of myoblasts over extracellular matrix.

Authors:  S L Goodman; G Risse; K von der Mark
Journal:  J Cell Biol       Date:  1989-08       Impact factor: 10.539

10.  Effects of cytochalasin D and latrunculin B on mechanical properties of cells.

Authors:  T Wakatsuki; B Schwab; N C Thompson; E L Elson
Journal:  J Cell Sci       Date:  2001-03       Impact factor: 5.285

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  84 in total

1.  Cancer cell stiffness: integrated roles of three-dimensional matrix stiffness and transforming potential.

Authors:  Erin L Baker; Jing Lu; Dihua Yu; Roger T Bonnecaze; Muhammad H Zaman
Journal:  Biophys J       Date:  2010-10-06       Impact factor: 4.033

2.  Biochemical and mechanical extracellular matrix properties dictate mammary epithelial cell motility and assembly.

Authors:  Olga Shebanova; Daniel A Hammer
Journal:  Biotechnol J       Date:  2011-12-16       Impact factor: 4.677

3.  Mathematical modelling and numerical simulations of actin dynamics in the eukaryotic cell.

Authors:  Uduak Z George; Angélique Stéphanou; Anotida Madzvamuse
Journal:  J Math Biol       Date:  2012-03-21       Impact factor: 2.259

4.  An optical method to quantify the density of ligands for cell adhesion receptors in three-dimensional matrices.

Authors:  Dimitrios S Tzeranis; Amit Roy; Peter T C So; Ioannis V Yannas
Journal:  J R Soc Interface       Date:  2010-07-29       Impact factor: 4.118

Review 5.  Protein-engineered biomaterials: nanoscale mimics of the extracellular matrix.

Authors:  Nicole H Romano; Debanti Sengupta; Cindy Chung; Sarah C Heilshorn
Journal:  Biochim Biophys Acta       Date:  2010-07-18

6.  Deterministic model of dermal wound invasion incorporating receptor-mediated signal transduction and spatial gradient sensing.

Authors:  Jason M Haugh
Journal:  Biophys J       Date:  2006-01-13       Impact factor: 4.033

7.  Migration of tumor cells in 3D matrices is governed by matrix stiffness along with cell-matrix adhesion and proteolysis.

Authors:  Muhammad H Zaman; Linda M Trapani; Alisha L Sieminski; Alisha Siemeski; Drew Mackellar; Haiyan Gong; Roger D Kamm; Alan Wells; Douglas A Lauffenburger; Paul Matsudaira
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-10       Impact factor: 11.205

8.  An integrated systems biology approach to understanding the rules of keratinocyte colony formation.

Authors:  Tao Sun; Phil McMinn; Simon Coakley; Mike Holcombe; Rod Smallwood; Sheila Macneil
Journal:  J R Soc Interface       Date:  2007-12-22       Impact factor: 4.118

9.  A simple immune system simulation reveals optimal movement and cell density parameters for successful target clearance.

Authors:  David Nicholson; Lindsay B Nicholson
Journal:  Immunology       Date:  2007-11-05       Impact factor: 7.397

Review 10.  Cell responses to the mechanochemical microenvironment--implications for regenerative medicine and drug delivery.

Authors:  Florian Rehfeldt; Adam J Engler; Adam Eckhardt; Fariyal Ahmed; Dennis E Discher
Journal:  Adv Drug Deliv Rev       Date:  2007-08-14       Impact factor: 15.470

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