Literature DB >> 15906117

Localization properties of electronic states in a polaron model of poly(dG)-poly(dC) and poly(dA)-poly(dT) DNA polymers.

H Yamada1, E B Starikov, D Hennig, J F R Archilla.   

Abstract

We numerically investigate localization properties of electronic states in a static model of poly(dG)-poly(dC) and poly(dA)-poly(dT) DNA polymers with realistic parameters obtained by quantum-chemical calculation. The randomness in the on-site energies caused by the electron-phonon coupling is completely correlated to the off-diagonal parts. In the single electron model, the effect of the hydrogen-bond stretchings, the twist angles between the base pairs and the finite system size effects on the energy dependence of the localization length and on the Lyapunov exponent are given. The localization length is reduced by the influence of the fluctuations in the hydrogen bond stretchings. It is also shown that the helical twist angle affects the localization length in the poly(dG)-poly(dC) DNA polymer more strongly than in the poly(dA)-poly(dT) one. Furthermore, we show resonance structures in the energy dependence of the localization length when the system size is relatively small.

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Year:  2005        PMID: 15906117     DOI: 10.1140/epje/i2004-10135-8

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  9 in total

1.  Numerical study of Lyapunov exponents for products of correlated random matrices.

Authors:  H Yamada; T Okabe
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2001-01-18

2.  Polarons in DNA.

Authors:  E M Conwell; S V Rakhmanova
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-25       Impact factor: 11.205

3.  Charge transport along the lambda-DNA double helix.

Authors:  P Tran; B Alavi; G Gruner
Journal:  Phys Rev Lett       Date:  2000-08-14       Impact factor: 9.161

4.  Charge migration in DNA: ion-gated transport.

Authors:  R N Barnett; C L Cleveland; A Joy; U Landman; G B Schuster
Journal:  Science       Date:  2001-10-19       Impact factor: 47.728

5.  Sequence dependent DNA-mediated conduction.

Authors:  Stephan Roche
Journal:  Phys Rev Lett       Date:  2003-09-03       Impact factor: 9.161

6.  Absence of localization in certain statically disordered lattices in any spatial dimension.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1989-12-01

7.  Electrical conduction through poly(dA)-poly(dT) and poly(dG)-poly(dC) DNA molecules.

Authors:  K H Yoo; D H Ha; J O Lee; J W Park; J Kim; J J Kim; H Y Lee; T Kawai; H Y Choi
Journal:  Phys Rev Lett       Date:  2001-10-23       Impact factor: 9.161

8.  Charge Transport in Poly(dG)-Poly(dC) and Poly(dA)-Poly(dT) DNA Polymers.

Authors:  D Hennig; E B Starikov; J F R Archilla; F Palmero
Journal:  J Biol Phys       Date:  2004-09       Impact factor: 1.365

9.  Metal-insulator transition in chains with correlated disorder.

Authors:  Pedro Carpena; Pedro Bernaola-Galván; Plamen Ch Ivanov; H Eugene Stanley
Journal:  Nature       Date:  2002-08-29       Impact factor: 49.962

  9 in total

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