Literature DB >> 15900492

Immunoglobulin light-chain genes in the rhesus macaque I: kappa light-chain germline sequences for subgroups IGKV1, IGKV and IGKV3.

Wendy A Howard1, Jon M Bible, Eva Finlay-Dijsselbloem, Sam Openshaw, Deborah K Dunn-Walters.   

Abstract

The combined processes of immunoglobulin (IG) gene rearrangement and somatic hypermutation allow for the creation of an extremely diverse antibody repertoire. Knowledge of the germline sequence of the IG genes is required so that hypermutation and the affinity matured humoral response can be properly studied. Variable region genes can be arranged into subgroups; in humans, there are 11 IGLV subgroups and six IGKV subgroups. The rhesus macaque (Macaca mulatta) is a relevant non-human primate model for human immunological systems. A number of macaque IGHV, IGHD and IGHJ genes have already been reported, but only one light-chain germline gene has been published so far. Here we report the isolation of new macaque IGKV genes by polymerase chain reaction (PCR) amplification from macaque genomic DNA using primers based on the human sequences. Twenty-eight IGKV1, 22 IGKV2 and 12 IGKV3 germline genes for the macaque were found, the open reading frames of which exhibit high homology to their human counterparts (>96, >99 and >96%, respectively).

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Year:  2005        PMID: 15900492     DOI: 10.1007/s00251-005-0794-2

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  21 in total

1.  Variable region gene segment utilization in rhesus monkey hybridomas producing human red blood cell-specific antibodies: predominance of the VH4 family but not VH4-21 (V4-34).

Authors:  J S Andris; A B Miller; S R Abraham; S Cunningham; F Roubinet; A Blancher; J D Capra
Journal:  Mol Immunol       Date:  1997-02       Impact factor: 4.407

2.  Structural determinants in the sequences of immunoglobulin variable domain.

Authors:  C Chothia; I Gelfand; A Kister
Journal:  J Mol Biol       Date:  1998-05-01       Impact factor: 5.469

3.  Pertinence of kappa and lambda recombinant antibodies directed against thyroid peroxidase in thyroid autoimmune disease.

Authors:  D Bresson; T Chardès; N Chapal; C Bès; M Cerutti; G Devauchelle; M Bouanani; J C Mani; S Péraldi-Roux
Journal:  Hum Antibodies       Date:  2001

4.  IGHV1, IGHV5 and IGHV7 subgroup genes in the rhesus macaque.

Authors:  Jon M Bible; Wendy Howard; Helena Robbins; Deborah K Dunn-Walters
Journal:  Immunogenetics       Date:  2003-02-21       Impact factor: 2.846

5.  Nomenclature of the human immunoglobulin kappa (IGK) genes.

Authors:  M P Lefranc
Journal:  Exp Clin Immunogenet       Date:  2001

6.  Nomenclature and overview of the mouse (Mus musculus and Mus sp.) immunoglobulin kappa (IGK) genes.

Authors:  C Martinez-Jean; G Folch; M P Lefranc
Journal:  Exp Clin Immunogenet       Date:  2001

7.  Evidence for a rhesus monkey model of asymptomatic tuberculosis.

Authors:  Bobby J Gormus; James L Blanchard; Xavier H Alvarez; Peter J Didier
Journal:  J Med Primatol       Date:  2004-06       Impact factor: 0.667

8.  Profile of lambda light chain variable region genes in Graves' orbital tissue.

Authors:  M F Prummel; G Chazenbalk; J C Jaume; B Rapoport; S M McLachlan
Journal:  Mol Immunol       Date:  1994-08       Impact factor: 4.407

9.  CpG oligodeoxynucleotides improve the response to hepatitis B immunization in healthy and SIV-infected rhesus macaques.

Authors:  Daniela Verthelyi; Vivian W Wang; Jeffrey D Lifson; Dennis M Klinman
Journal:  AIDS       Date:  2004-04-30       Impact factor: 4.177

10.  IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes.

Authors:  Véronique Giudicelli; Denys Chaume; Marie-Paule Lefranc
Journal:  Nucleic Acids Res       Date:  2005-01-01       Impact factor: 16.971

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  11 in total

1.  Immunoglobulin light-chain genes in the rhesus macaque II: lambda light-chain germline sequences for subgroups IGLV1, IGLV2, IGLV3, IGLV4 and IGLV5.

Authors:  Wendy A Howard; Jon M Bible; Eva Finlay-Dijsselbloem; Sam Openshaw; Deborah K Dunn-Walters
Journal:  Immunogenetics       Date:  2005-10-18       Impact factor: 2.846

2.  High-resolution definition of vaccine-elicited B cell responses against the HIV primary receptor binding site.

Authors:  Christopher Sundling; Yuxing Li; Nick Huynh; Christian Poulsen; Richard Wilson; Sijy O'Dell; Yu Feng; John R Mascola; Richard T Wyatt; Gunilla B Karlsson Hedestam
Journal:  Sci Transl Med       Date:  2012-07-11       Impact factor: 17.956

3.  Rapid Generation of Human-Like Neutralizing Monoclonal Antibodies in Urgent Preparedness for Influenza Pandemics and Virulent Infectious Diseases.

Authors:  Weixu Meng; Weiqi Pan; Anna J X Zhang; Zhengfeng Li; Guowei Wei; Liqiang Feng; Zhenyuan Dong; Chufang Li; Xiangjing Hu; Caijun Sun; Qinfang Luo; Kwok-Yung Yuen; Nanshan Zhong; Ling Chen
Journal:  PLoS One       Date:  2013-06-18       Impact factor: 3.240

4.  Use of molecular modeling and site-directed mutagenesis to define the structural basis for the immune response to carbohydrate xenoantigens.

Authors:  Mary Kearns-Jonker; Natasha Barteneva; Robert Mencel; Namath Hussain; Irina Shulkin; Alan Xu; Margaret Yew; Donald V Cramer
Journal:  BMC Immunol       Date:  2007-03-12       Impact factor: 3.615

5.  Efficient generation of monoclonal antibodies from single rhesus macaque antibody secreting cells.

Authors:  Weixu Meng; Leike Li; Wei Xiong; Xuejun Fan; Hui Deng; Andrew J Bett; Zhifeng Chen; Aimin Tang; Kara S Cox; Joseph G Joyce; Daniel C Freed; Elizabeth Thoryk; Tong-Ming Fu; Danilo R Casimiro; Ningyan Zhang; Kalpit A Vora; Zhiqiang An
Journal:  MAbs       Date:  2015       Impact factor: 5.857

6.  HIV-1 Vaccine-elicited Antibodies Reverted to Their Inferred Naive Germline Reveal Associations between Binding Affinity and in vivo Activation.

Authors:  Kaifan Dai; Salar N Khan; Yimeng Wang; Linling He; Javier Guenaga; Jidnyasa Ingale; Christopher Sundling; Sijy O'Dell; Krisha McKee; Ganesh Phad; Martin Corcoran; Richard Wilson; John R Mascola; Jiang Zhu; Yuxing Li; Gunilla B Karlsson Hedestam; Richard T Wyatt
Journal:  Sci Rep       Date:  2016-02-16       Impact factor: 4.379

7.  IMPre: An Accurate and Efficient Software for Prediction of T- and B-Cell Receptor Germline Genes and Alleles from Rearranged Repertoire Data.

Authors:  Wei Zhang; I-Ming Wang; Changxi Wang; Liya Lin; Xianghua Chai; Jinghua Wu; Andrew J Bett; Govindarajan Dhanasekaran; Danilo R Casimiro; Xiao Liu
Journal:  Front Immunol       Date:  2016-11-04       Impact factor: 7.561

8.  A comprehensive profiling of T- and B-lymphocyte receptor repertoires from a Chinese-origin rhesus macaque by high-throughput sequencing.

Authors:  Longfei Fu; Xinyang Li; Wei Zhang; Changxi Wang; Jinghua Wu; Huanming Yang; Jian Wang; Xiao Liu
Journal:  PLoS One       Date:  2017-08-16       Impact factor: 3.240

9.  VDJ Gene Usage in IgM Repertoires of Rhesus and Cynomolgus Macaques.

Authors:  Mark Chernyshev; Mateusz Kaduk; Martin Corcoran; Gunilla B Karlsson Hedestam
Journal:  Front Immunol       Date:  2022-01-11       Impact factor: 7.561

10.  IMGT® Biocuration and Analysis of the Rhesus Monkey IG Loci.

Authors:  Viviane Nguefack Ngoune; Morgane Bertignac; Maria Georga; Ariadni Papadaki; Alexandre Albani; Géraldine Folch; Joumana Jabado-Michaloud; Véronique Giudicelli; Patrice Duroux; Marie-Paule Lefranc; Sofia Kossida
Journal:  Vaccines (Basel)       Date:  2022-03-03
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