Literature DB >> 15892251

Maximizing discovery efficiency with a computationally driven fragment approach.

William R Moore1.   

Abstract

A reliable and accurate method for the computational design of novel drug candidates has been a passionate pursuit of the pharmaceutical industry. Such technology would dramatically improve the efficiency of drug discovery by quickly and inexpensively providing potent molecules that can be further prioritized for synthesis based on characteristics such as patentability, specific protein-ligand interactions, ease of chemical synthesis, protein selectivity and pharmacological considerations. Described herein is the progress made at Locus Pharmaceuticals Inc toward achieving this ideal with a fragment-driven, computationally directed approach to small-molecule discovery. Specific lead identification examples from Locus Pharmaceuticals discovery programs demonstrate the efficiency and cost-effectiveness realized by such an approach.

Mesh:

Year:  2005        PMID: 15892251

Source DB:  PubMed          Journal:  Curr Opin Drug Discov Devel        ISSN: 1367-6733


  8 in total

1.  The multiple roles of computational chemistry in fragment-based drug design.

Authors:  Richard Law; Oliver Barker; John J Barker; Thomas Hesterkamp; Robert Godemann; Ole Andersen; Tara Fryatt; Steve Courtney; Dave Hallett; Mark Whittaker
Journal:  J Comput Aided Mol Des       Date:  2009-06-17       Impact factor: 3.686

2.  Molecular modeling and functional confirmation of a predicted fatty acid binding site of mitochondrial aspartate aminotransferase.

Authors:  Michael W Bradbury; Decherd Stump; Frank Guarnieri; Paul D Berk
Journal:  J Mol Biol       Date:  2011-07-22       Impact factor: 5.469

3.  The rational design of a novel potent analogue of the 5'-AMP-activated protein kinase inhibitor compound C with improved selectivity and cellular activity.

Authors:  Fouzia Machrouhi; Nouara Ouhamou; Keith Laderoute; Joy Calaoagan; Marina Bukhtiyarova; Paula J Ehrlich; Anthony E Klon
Journal:  Bioorg Med Chem Lett       Date:  2010-09-19       Impact factor: 2.823

Review 4.  Perspectives on NMR in drug discovery: a technique comes of age.

Authors:  Maurizio Pellecchia; Ivano Bertini; David Cowburn; Claudio Dalvit; Ernest Giralt; Wolfgang Jahnke; Thomas L James; Steve W Homans; Horst Kessler; Claudio Luchinat; Bernd Meyer; Hartmut Oschkinat; Jeff Peng; Harald Schwalbe; Gregg Siegal
Journal:  Nat Rev Drug Discov       Date:  2008-09       Impact factor: 84.694

Review 5.  Protein flexibility in docking and surface mapping.

Authors:  Katrina W Lexa; Heather A Carlson
Journal:  Q Rev Biophys       Date:  2012-05-09       Impact factor: 5.318

6.  Minimal pharmacophoric elements and fragment hopping, an approach directed at molecular diversity and isozyme selectivity. Design of selective neuronal nitric oxide synthase inhibitors.

Authors:  Haitao Ji; Benjamin Z Stanton; Jotaro Igarashi; Huiying Li; Pavel Martásek; Linda J Roman; Thomas L Poulos; Richard B Silverman
Journal:  J Am Chem Soc       Date:  2008-03-06       Impact factor: 15.419

7.  Hot-spot identification on a broad class of proteins and RNA suggest unifying principles of molecular recognition.

Authors:  John L Kulp; Ian S Cloudsdale; John L Kulp; Frank Guarnieri
Journal:  PLoS One       Date:  2017-08-24       Impact factor: 3.240

8.  AutoGrow4: an open-source genetic algorithm for de novo drug design and lead optimization.

Authors:  Jacob O Spiegel; Jacob D Durrant
Journal:  J Cheminform       Date:  2020-04-17       Impact factor: 5.514

  8 in total

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