Literature DB >> 15891897

Identification of three shikimate kinase genes in rice: characterization of their differential expression during panicle development and of the enzymatic activities of the encoded proteins.

Koji Kasai1, Takuya Kanno, Mitsuru Akita, Yasuko Ikejiri-Kanno, Kyo Wakasa, Yuzuru Tozawa.   

Abstract

The shikimate pathway is common to the biosynthesis of the three aromatic amino acids and that of various secondary metabolites in land plants. Shikimate kinase (SK; EC 2.7.1.71) catalyzes the phosphorylation of shikimate to yield shikimate 3-phosphate. In an attempt to elucidate the functional roles of enzymes that participate in the shikimate pathway in rice (Oryza sativa), we have now identified and characterized cDNAs corresponding to three SK genes--OsSK1, OsSK2, and OsSK3--in this monocotyledenous plant. These SK cDNAs encode proteins with different NH(2)-terminal regions and with putative mature regions that share sequence similarity with other plant and microbial SK proteins. An in vitro assay of protein import into intact chloroplasts isolated from pea (Pisum sativum) seedlings revealed that the full-length forms of the three rice SK proteins are translocated into chloroplasts and processed, consistent with the assumption that the different NH(2)-terminal sequences function as chloroplast transit peptides. The processed forms of all three rice proteins synthesized in vitro manifested SK catalytic activity. Northern blot analysis revealed that the expression of OsSK1 and OsSK2 was induced in rice calli by treatment with the elicitor N-acetylchitoheptaose, and that expression of OsSK1 and OsSK3 was up-regulated specifically during the heading stage of panicle development. These results suggest that differential expression of the three rice SK genes and the accompanying changes in the production of shikimate 3-phosphate may contribute to the defense response and to panicle development in rice.

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Year:  2005        PMID: 15891897     DOI: 10.1007/s00425-005-1559-8

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  32 in total

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Authors:  K. M. Herrmann
Journal:  Plant Cell       Date:  1995-07       Impact factor: 11.277

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Journal:  Nucleic Acids Res       Date:  1989-02-25       Impact factor: 16.971

3.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

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Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

4.  Flavonoids and isoflavonoids - a gold mine for metabolic engineering.

Authors: 
Journal:  Trends Plant Sci       Date:  1999-10       Impact factor: 18.313

5.  Predicting subcellular localization of proteins based on their N-terminal amino acid sequence.

Authors:  O Emanuelsson; H Nielsen; S Brunak; G von Heijne
Journal:  J Mol Biol       Date:  2000-07-21       Impact factor: 5.469

6.  Nuclear encoding of a plastid sigma factor in rice and its tissue- and light-dependent expression.

Authors:  Y Tozawa; K Tanaka; H Takahashi; K Wakasa
Journal:  Nucleic Acids Res       Date:  1998-01-15       Impact factor: 16.971

7.  The in-vitro synthesized tomato shikimate kinase precursor is enzymatically active and is imported and processed to the mature enzyme by chloroplasts.

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Journal:  Plant J       Date:  1992-05       Impact factor: 6.417

8.  Abundance of transcripts specific for genes encoding enzymes of the prechorismate pathway in different organs of tomato (Lycopersicon esculentum L.) plants.

Authors:  J Görlach; J Schmid; N Amrhein
Journal:  Planta       Date:  1994       Impact factor: 4.116

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Authors:  Klaus M. Herrmann; Lisa M. Weaver
Journal:  Annu Rev Plant Physiol Plant Mol Biol       Date:  1999-06

10.  Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold.

Authors:  J E Walker; M Saraste; M J Runswick; N J Gay
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  16 in total

1.  The Biosynthetic Pathways for Shikimate and Aromatic Amino Acids in Arabidopsis thaliana.

Authors:  Vered Tzin; Gad Galili
Journal:  Arabidopsis Book       Date:  2010-05-17

2.  Tissue-adapted invasion strategies of the rice blast fungus Magnaporthe oryzae.

Authors:  Sylvain Marcel; Ruairidh Sawers; Edward Oakeley; Herbert Angliker; Uta Paszkowski
Journal:  Plant Cell       Date:  2010-09-21       Impact factor: 11.277

3.  Structural and biochemical investigation of two Arabidopsis shikimate kinases: the heat-inducible isoform is thermostable.

Authors:  Geoffrey Fucile; Christel Garcia; Jonas Carlsson; Maria Sunnerhagen; Dinesh Christendat
Journal:  Protein Sci       Date:  2011-05-31       Impact factor: 6.725

4.  Genome-wide in silico analysis of long intergenic non-coding RNAs from rice peduncles at the heading stage.

Authors:  Manu Kandpal; Namrata Dhaka; Rita Sharma
Journal:  Physiol Mol Biol Plants       Date:  2021-10-12

5.  Mutation of a rice gene encoding a phenylalanine biosynthetic enzyme results in accumulation of phenylalanine and tryptophan.

Authors:  Tetsuya Yamada; Fumio Matsuda; Koji Kasai; Shuichi Fukuoka; Keisuke Kitamura; Yuzuru Tozawa; Hisashi Miyagawa; Kyo Wakasa
Journal:  Plant Cell       Date:  2008-05-16       Impact factor: 11.277

6.  Transcriptome-Wide Identification of miRNA Targets under Nitrogen Deficiency in Populus tomentosa Using Degradome Sequencing.

Authors:  Min Chen; Hai Bao; Qiuming Wu; Yanwei Wang
Journal:  Int J Mol Sci       Date:  2015-06-18       Impact factor: 5.923

7.  Leaf Physiological and Proteomic Analysis to Elucidate Silicon Induced Adaptive Response under Salt Stress in Rosa hybrida 'Rock Fire'.

Authors:  Prabhakaran Soundararajan; Abinaya Manivannan; Chung Ho Ko; Sowbiya Muneer; Byoung Ryong Jeong
Journal:  Int J Mol Sci       Date:  2017-08-14       Impact factor: 5.923

8.  Herbaspirillum rubrisubalbicans, a mild pathogen impairs growth of rice by augmenting ethylene levels.

Authors:  Glaucio Valdameri; Dayane Alberton; Vivian Rotuno Moure; Thiago Borba Kokot; Caroline Kukolj; Liziane Cristina Campos Brusamarello-Santos; Rose Adele Monteiro; Fabio de Oliveira Pedrosa; Emanuel Maltempi de Souza
Journal:  Plant Mol Biol       Date:  2017-07-03       Impact factor: 4.076

9.  Evolutionary diversification of plant shikimate kinase gene duplicates.

Authors:  Geoffrey Fucile; Shannon Falconer; Dinesh Christendat
Journal:  PLoS Genet       Date:  2008-12-05       Impact factor: 5.917

10.  Aroma volatile analyses and 2AP characterization at various developmental stages in Basmati and Non-Basmati scented rice (Oryza sativa L.) cultivars.

Authors:  Vidya R Hinge; Hemant B Patil; Altafhusain B Nadaf
Journal:  Rice (N Y)       Date:  2016-08-05       Impact factor: 4.783

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