Literature DB >> 15890926

Complete translation of the hepatitis C virus genome in vitro: membranes play a critical role in the maturation of all virus proteins except for NS3.

Yuri V Svitkin1, Arnim Pause, Marcelo Lopez-Lastra, Sandra Perreault, Nahum Sonenberg.   

Abstract

We developed an in vitro translation extract from Krebs-2 cells that translates the entire open reading frame of the hepatitis C virus (HCV) strain H77 and properly processes the viral protein precursors when supplemented with canine microsomal membranes (CMMs). Translation of the C-terminal portion of the viral polyprotein in this system is documented by the synthesis of NS5B. Evidence for posttranslational modification of the viral proteins, the N-terminal glycosylation of E1 and the E2 precursor (E2-p7), and phosphorylation of NS5A is presented. With the exception of NS3, efficient generation of all virus-specific proteins is CMM dependent. A time course of the appearance of HCV products indicates that the viral polyprotein is cleaved cotranslationally. A competitive inhibitor of the NS3 protease inhibited accumulation of NS3, NS4B, NS5A, and NS5B, but not that of NS2 or structural proteins. CMMs also stabilized HCV mRNA during translation. Finally, the formyl-[35S]methionyl moiety of the initiator tRNA(Met) was incorporated exclusively into the core protein portion of the polyprotein, demonstrating that translation initiation in this system occurs with high fidelity.

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Year:  2005        PMID: 15890926      PMCID: PMC1112104          DOI: 10.1128/JVI.79.11.6868-6881.2005

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  88 in total

Review 1.  Overview of hepatitis C virus genome structure, polyprotein processing, and protein properties.

Authors:  K E Reed; C M Rice
Journal:  Curr Top Microbiol Immunol       Date:  2000       Impact factor: 4.291

2.  Macrocyclic inhibitors of the NS3 protease as potential therapeutic agents of hepatitis C virus infection.

Authors:  Youla S Tsantrizos; Gordon Bolger; Pierre Bonneau; Dale R Cameron; Nathalie Goudreau; George Kukolj; Steven R LaPlante; Montse Llinàs-Brunet; Herbert Nar; Daniel Lamarre
Journal:  Angew Chem Int Ed Engl       Date:  2003-03-28       Impact factor: 15.336

3.  Alternate translation occurs within the core coding region of the hepatitis C viral genome.

Authors:  Agoritsa Varaklioti; Niki Vassilaki; Urania Georgopoulou; Penelope Mavromara
Journal:  J Biol Chem       Date:  2002-03-07       Impact factor: 5.157

4.  Hepatitis C virus core particle detected by immunoelectron microscopy and optical rotation technique.

Authors:  S Ishida; M Kaito; M Kohara; K Tsukiyama-Kohora; N Fujita; J Ikoma; Y Adachi; S Watanabe
Journal:  Hepatol Res       Date:  2001-07       Impact factor: 4.288

5.  Preparation of microsomal membranes for cotranslational protein translocation.

Authors:  P Walter; G Blobel
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

Review 6.  Biochemical and immunologic properties of the nonstructural proteins of the hepatitis C virus: implications for development of antiviral agents and vaccines.

Authors:  R De Francesco; P Neddermann; L Tomei; C Steinkühler; P Gallinari; A Folgori
Journal:  Semin Liver Dis       Date:  2000       Impact factor: 6.115

7.  Biosynthesis and biochemical properties of the hepatitis C virus core protein.

Authors:  E Santolini; G Migliaccio; N La Monica
Journal:  J Virol       Date:  1994-06       Impact factor: 5.103

8.  Stability of a stem-loop involving the initiator AUG controls the efficiency of internal initiation of translation on hepatitis C virus RNA.

Authors:  M Honda; E A Brown; S M Lemon
Journal:  RNA       Date:  1996-10       Impact factor: 4.942

9.  Internal ribosome entry site within hepatitis C virus RNA.

Authors:  K Tsukiyama-Kohara; N Iizuka; M Kohara; A Nomoto
Journal:  J Virol       Date:  1992-03       Impact factor: 5.103

10.  Functional properties of a monoclonal antibody inhibiting the hepatitis C virus RNA-dependent RNA polymerase.

Authors:  Darius Moradpour; Elke Bieck; Thomas Hügle; Winfried Wels; Jim Zhen Wu; Zhi Hong; Hubert E Blum; Ralf Bartenschlager
Journal:  J Biol Chem       Date:  2001-10-18       Impact factor: 5.157

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  7 in total

1.  A cell-permeable peptide inhibits hepatitis C virus replication by sequestering IRES transacting factors.

Authors:  Vanessa Fontanes; Santanu Raychaudhuri; Asim Dasgupta
Journal:  Virology       Date:  2009-09-08       Impact factor: 3.616

2.  DAP5 associates with eIF2β and eIF4AI to promote Internal Ribosome Entry Site driven translation.

Authors:  Noa Liberman; Valentina Gandin; Yuri V Svitkin; Maya David; Geneviève Virgili; Maritza Jaramillo; Martin Holcik; Bhushan Nagar; Adi Kimchi; Nahum Sonenberg
Journal:  Nucleic Acids Res       Date:  2015-03-16       Impact factor: 16.971

3.  N1-methyl-pseudouridine in mRNA enhances translation through eIF2α-dependent and independent mechanisms by increasing ribosome density.

Authors:  Yuri V Svitkin; Yi Min Cheng; Tirtha Chakraborty; Vladimir Presnyak; Matthias John; Nahum Sonenberg
Journal:  Nucleic Acids Res       Date:  2017-06-02       Impact factor: 16.971

4.  Membrane-dependent relief of translation elongation arrest on pseudouridine- and N1-methyl-pseudouridine-modified mRNAs.

Authors:  Yuri V Svitkin; Anne-Claude Gingras; Nahum Sonenberg
Journal:  Nucleic Acids Res       Date:  2022-07-22       Impact factor: 19.160

5.  Analysis of natural variants of the hepatitis C virus internal ribosome entry site reveals that primary sequence plays a key role in cap-independent translation.

Authors:  María Inés Barría; Angel González; Jorge Vera-Otarola; Ursula León; Valeska Vollrath; Delphine Marsac; Octavio Monasterio; Tomás Pérez-Acle; Alejandro Soza; Marcelo López-Lastra
Journal:  Nucleic Acids Res       Date:  2008-12-23       Impact factor: 16.971

6.  A cooperative interaction between nontranslated RNA sequences and NS5A protein promotes in vivo fitness of a chimeric hepatitis C/GB virus B.

Authors:  Lucile Warter; Lisette Cohen; Yann Benureau; Deborah Chavez; Yan Yang; Francis Bodola; Stanley M Lemon; Cinzia Traboni; Robert E Lanford; Annette Martin
Journal:  PLoS One       Date:  2009-02-10       Impact factor: 3.240

7.  The association of toll-like receptor 4 polymorphism with hepatitis C virus infection in Saudi Arabian patients.

Authors:  Ahmed A Al-Qahtani; Mashael R Al-Anazi; Fahad Al-Zoghaibi; Ayman A Abdo; Faisal M Sanai; Mohammed Q Khan; Ali Albenmousa; Hamad I Al-Ashgar; Mohammed N Al-Ahdal
Journal:  Biomed Res Int       Date:  2014-08-10       Impact factor: 3.411

  7 in total

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