Literature DB >> 15888574

Intracellular signaling: spatial and temporal control.

Ion I Moraru1, Leslie M Loew.   

Abstract

Cells integrate many inputs through complex networks of interacting signaling pathways. Systems approaches as well as computer-aided reductionist approaches attempt to "untangle the wires" and gain an intimate understanding of cells. But "understanding" any system is just the way that the human mind gains the ability to predict behavior. Computer simulations are an alternative way to achieve this goal--quite possibly the only way for complex systems. We have new tools to probe large sets of unknown interactions, and we have amassed enough detailed information to quantitatively describe many functional modules. Cell physiology has passed the threshold: the time to begin modeling is now.

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Year:  2005        PMID: 15888574     DOI: 10.1152/physiol.00052.2004

Source DB:  PubMed          Journal:  Physiology (Bethesda)        ISSN: 1548-9221


  9 in total

1.  Context specific transcription factor prediction.

Authors:  Eric Yang; David Simcha; Richard R Almon; Debra C Dubois; William J Jusko; Ioannis P Androulakis
Journal:  Ann Biomed Eng       Date:  2007-03-22       Impact factor: 3.934

2.  Multilevel complexity of calcium signaling: Modeling angiogenesis.

Authors:  Luca Munaron; Marco Scianna
Journal:  World J Biol Chem       Date:  2012-06-26

3.  Virtual Cell modelling and simulation software environment.

Authors:  I I Moraru; J C Schaff; B M Slepchenko; M L Blinov; F Morgan; A Lakshminarayana; F Gao; Y Li; L M Loew
Journal:  IET Syst Biol       Date:  2008-09       Impact factor: 1.615

4.  Complexity and modularity of intracellular networks: a systematic approach for modelling and simulation.

Authors:  M L Blinov; O Ruebenacker; I I Moraru
Journal:  IET Syst Biol       Date:  2008-09       Impact factor: 1.615

5.  Pancreatic Beta Cell G-Protein Coupled Receptors and Second Messenger Interactions: A Systems Biology Computational Analysis.

Authors:  Leonid E Fridlyand; Louis H Philipson
Journal:  PLoS One       Date:  2016-05-03       Impact factor: 3.240

Review 6.  Multiscale models of angiogenesis.

Authors:  Amina A Qutub; Feilim Mac Gabhann; Emmanouil D Karagiannis; Prakash Vempati; Aleksander S Popel
Journal:  IEEE Eng Med Biol Mag       Date:  2009 Mar-Apr

7.  Stochastic aspects of oscillatory Ca2+ dynamics in hepatocytes.

Authors:  Geneviève Dupont; Aurélie Abou-Lovergne; Laurent Combettes
Journal:  Biophys J       Date:  2008-05-30       Impact factor: 4.033

8.  An integrated mathematical model of thrombin-, histamine-and VEGF-mediated signalling in endothelial permeability.

Authors:  X N Wei; B C Han; J X Zhang; X H Liu; C Y Tan; Y Y Jiang; B C Low; B Tidor; Y Z Chen
Journal:  BMC Syst Biol       Date:  2011-07-15

9.  Logic modeling and the ridiculome under the rug.

Authors:  Michael L Blinov; Ion I Moraru
Journal:  BMC Biol       Date:  2012-11-21       Impact factor: 7.431

  9 in total

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