Literature DB >> 15886389

A life science Semantic Web: are we there yet?

Eric Neumann1.   

Abstract

More than ever, life science researchers depend on information from multiple sources. The Semantic Web offers a powerful new strategy for consolidating both text and structured data into a comprehensive collections and views. In addition, these aggregates are readable by both humans and machines and could be the basis of information management and knowledge exchange.

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Year:  2005        PMID： 15886389     DOI： 10.1126/stke.2832005pe22

Source DB:  PubMed          Journal:  Sci STKE        ISSN： 1525-8882


  15 in total

1.  The RNA Ontology Consortium: an open invitation to the RNA community.

Authors:  Neocles B Leontis; Russ B Altman; Helen M Berman; Steven E Brenner; James W Brown; David R Engelke; Stephen C Harvey; Stephen R Holbrook; Fabrice Jossinet; Suzanna E Lewis; François Major; David H Mathews; Jane S Richardson; James R Williamson; Eric Westhof
Journal:  RNA       Date:  2006-02-16       Impact factor: 4.942

2.  semCDI: a query formulation for semantic data integration in caBIG.

Authors:  E Patrick Shironoshita; Yves R Jean-Mary; Ray M Bradley; Mansur R Kabuka
Journal:  J Am Med Inform Assoc       Date:  2008-04-24       Impact factor: 4.497

Review 3.  Lowering industry firewalls: pre-competitive informatics initiatives in drug discovery.

Authors:  Michael R Barnes; Lee Harland; Steven M Foord; Matthew D Hall; Ian Dix; Scott Thomas; Bryn I Williams-Jones; Cory R Brouwer
Journal:  Nat Rev Drug Discov       Date:  2009-07-17       Impact factor: 84.694

4.  Chem2Bio2RDF: a semantic framework for linking and data mining chemogenomic and systems chemical biology data.

Authors:  Bin Chen; Xiao Dong; Dazhi Jiao; Huijun Wang; Qian Zhu; Ying Ding; David J Wild
Journal:  BMC Bioinformatics       Date:  2010-05-17       Impact factor: 3.169

5.  Semantically enabled and statistically supported biological hypothesis testing with tissue microarray databases.

Authors:  Young Soo Song; Chan Hee Park; Hee-Joon Chung; Hyunjung Shin; Jihun Kim; Ju Han Kim
Journal:  BMC Bioinformatics       Date:  2011-02-15       Impact factor: 3.169

6.  TOPSAN: a dynamic web database for structural genomics.

Authors:  Kyle Ellrott; Christian M Zmasek; Dana Weekes; S Sri Krishna; Constantina Bakolitsa; Adam Godzik; John Wooley
Journal:  Nucleic Acids Res       Date:  2010-10-20       Impact factor: 16.971

7.  Biomedical semantics in the Semantic Web.

Authors:  Andrea Splendiani; Albert Burger; Adrian Paschke; Paolo Romano; M Scott Marshall
Journal:  J Biomed Semantics       Date:  2011-03-07

Review 8.  Life Sciences and the web: a new era for collaboration.

Authors:  Jonathan A Sagotsky; Le Zhang; Zhihui Wang; Sean Martin; Thomas S Deisboeck
Journal:  Mol Syst Biol       Date:  2008-07-01       Impact factor: 11.429

9.  Structuring and extracting knowledge for the support of hypothesis generation in molecular biology.

Authors:  Marco Roos; M Scott Marshall; Andrew P Gibson; Martijn Schuemie; Edgar Meij; Sophia Katrenko; Willem Robert van Hage; Konstantinos Krommydas; Pieter W Adriaans
Journal:  BMC Bioinformatics       Date:  2009-10-01       Impact factor: 3.169

10.  Advancing cancer systems biology: introducing the Center for the Development of a Virtual Tumor, CViT.

Authors:  Thomas S Deisboeck; Le Zhang; Sean Martin
Journal:  Cancer Inform       Date:  2007-03-30
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