Literature DB >> 15884947

Intramolecular general acid catalysis of phosphate transfer. nucleophilic attack by oxyanions on the PO3 2- group.

Anthony J Kirby1, Neil Dutta-Roy, Davi da Silva, Jonathan M Goodman, Marcelo F Lima, Christo D Roussev, Faruk Nome.   

Abstract

Phosphate transfer from the 8-dimethylammonium-naphthyl-1-phosphate monoanion 4m to water and to a range of nucleophiles shows general acid catalysis by the neighboring NH(+) group, through the strong intramolecular hydrogen bond. Reactivity is insensitive to the charge on the nucleophile, so that fluoride and oxyanions displace dimethylaminonaphthol from the PO3(2-) group as effectively as do amines of the same basicity. Reactivity is (predictably) relatively insensitive to the basicity of the nucleophile and to the alpha-effect. A strong intramolecular hydrogen bond is present in the product, but also in the reactant, as evidenced by major perturbations in the pK(a)'s of the phosphate and dimethylamino groups, to 3.94 and 9.31, respectively, and by ab initio calculations. Rate accelerations are of the order of 10(6)-fold despite this stabilization: the strength of the hydrogen bond is evidently significantly enhanced in the transition state. The evidence suggests that it also depends remarkably strongly on the degree of ionization of the reacting phosphate group and will be significantly reduced for the neutral PO(OH)2 group. Thus, the hydrolysis of the substrate cation 4+ shows a correspondingly greater, >10(8)-fold acceleration.

Entities:  

Year:  2005        PMID: 15884947     DOI: 10.1021/ja0502876

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  5 in total

1.  Insights into the reaction of protein-tyrosine phosphatase 1B: crystal structures for transition state analogs of both catalytic steps.

Authors:  Tiago A S Brandão; Alvan C Hengge; Sean J Johnson
Journal:  J Biol Chem       Date:  2010-03-16       Impact factor: 5.157

2.  Impaired acid catalysis by mutation of a protein loop hinge residue in a YopH mutant revealed by crystal structures.

Authors:  Tiago A S Brandão; Howard Robinson; Sean J Johnson; Alvan C Hengge
Journal:  J Am Chem Soc       Date:  2009-01-21       Impact factor: 15.419

3.  DFT investigations of phosphotriesters hydrolysis in aqueous solution: a model for DNA single strand scission induced by N-nitrosoureas.

Authors:  Tingting Liu; Lijiao Zhao; Rugang Zhong
Journal:  J Mol Model       Date:  2012-09-22       Impact factor: 1.810

4.  Nanomolar, Noncovalent Antagonism of Hedgehog Cholesterolysis: Exception to the "Irreversibility Rule" for Protein Autoprocessing Inhibition.

Authors:  Andrew G Wagner; Robert T Stagnitta; Zihan Xu; John L Pezzullo; Nabin Kandel; José-Luis Giner; Douglas F Covey; Chunyu Wang; Brian P Callahan
Journal:  Biochemistry       Date:  2021-12-23       Impact factor: 3.321

5.  How the Nature of an Alpha-Nucleophile Determines a Brønsted Type-Plot and Its Reaction Pathways. An Experimental Study.

Authors:  Paola R Campodónico; Ricardo A Tapia; Cristian Suárez-Rozas
Journal:  Front Chem       Date:  2022-02-02       Impact factor: 5.221

  5 in total

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