Literature DB >> 15880289

Motor proteins transporting cargos.

K B Zeldovich1, J-F Joanny, J Prost.   

Abstract

Processive motor proteins such as kinesin and myosin-V are enzymes that use the energy of ATP hydrolysis to travel along polar cytoskeletal filaments. One of the functions of these proteins is the transport of vesicles and protein complexes that are linked to the light chains of the motors. Modeling the light chain by a linear elastic spring, and using the two-state model for one- and two-headed molecular motors, we study the influence of thermal fluctuations of the cargo on the motion of the motor-cargo complex. We solve numerically the Fokker-Planck equations of motor motion, and find that the mean velocity of the motor-cargo complex decreases monotonously as the spring becomes softer. This effect is due to the random force of thermal fluctuations of the cargo disrupting the operation of the motor. Increasing the size (thus, the friction coefficient) of the cargo also decreases the velocity. Surprisingly, we find that for a given size of the cargo, the velocity has a maximum for a certain friction of the motor. We explain this effect by the interplay between the characteristic length of thermal fluctuations of the cargo on a spring, the motor diffusion length, and the filament period. Our results may be relevant for the interpretation of single-molecule experiments with molecular motors (bead assays), where the motor motion is observed by tracking of a bead attached to the motor.

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Year:  2005        PMID: 15880289     DOI: 10.1140/epje/i2004-10137-6

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  13 in total

1.  Theoretical formalism for kinesin motility I. Bead movement powered by single one-headed kinesins.

Authors:  Y d Chen
Journal:  Biophys J       Date:  2000-01       Impact factor: 4.033

2.  Theoretical formalism for bead movement powered by single two-headed motors in a motility assay.

Authors:  Y D Chen; B Yan
Journal:  Biophys Chem       Date:  2001-06-15       Impact factor: 2.352

3.  Fluctuation driven ratchets: Molecular motors.

Authors: 
Journal:  Phys Rev Lett       Date:  1994-03-14       Impact factor: 9.161

4.  Asymmetric pumping of particles.

Authors: 
Journal:  Phys Rev Lett       Date:  1994-04-18       Impact factor: 9.161

5.  Protein turbines. I: The bacterial flagellar motor.

Authors:  T C Elston; G Oster
Journal:  Biophys J       Date:  1997-08       Impact factor: 4.033

6.  Thermodynamics and kinetics of a Brownian motor.

Authors:  R D Astumian
Journal:  Science       Date:  1997-05-09       Impact factor: 47.728

7.  Myosin V is a left-handed spiral motor on the right-handed actin helix.

Authors:  M Yusuf Ali; Sotaro Uemura; Kengo Adachi; Hiroyasu Itoh; Kazuhiko Kinosita; Shin'ichi Ishiwata
Journal:  Nat Struct Biol       Date:  2002-06

8.  Direct observation of kinesin stepping by optical trapping interferometry.

Authors:  K Svoboda; C F Schmidt; B J Schnapp; S M Block
Journal:  Nature       Date:  1993-10-21       Impact factor: 49.962

9.  Functional anatomy of the kinesin molecule in vivo.

Authors:  J Kirchner; S Seiler; S Fuchs; M Schliwa
Journal:  EMBO J       Date:  1999-08-16       Impact factor: 11.598

10.  KIF1A alternately uses two loops to bind microtubules.

Authors:  Ryo Nitta; Masahide Kikkawa; Yasushi Okada; Nobutaka Hirokawa
Journal:  Science       Date:  2004-07-30       Impact factor: 47.728

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  3 in total

1.  The diffusion constant of a labeled protein sliding along DNA.

Authors:  I Bonnet; P Desbiolles
Journal:  Eur Phys J E Soft Matter       Date:  2011-03-11       Impact factor: 1.890

2.  Assembly and positioning of actomyosin rings by contractility and planar cell polarity.

Authors:  Ivonne M Sehring; Pierre Recho; Elsa Denker; Matthew Kourakis; Birthe Mathiesen; Edouard Hannezo; Bo Dong; Di Jiang
Journal:  Elife       Date:  2015-10-21       Impact factor: 8.140

3.  In vivo determination of fluctuating forces during endosome trafficking using a combination of active and passive microrheology.

Authors:  Damien Robert; Thi-Hanh Nguyen; François Gallet; Claire Wilhelm
Journal:  PLoS One       Date:  2010-04-06       Impact factor: 3.240

  3 in total

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