Literature DB >> 15876565

Novel RepA-MCM proteins encoded in plasmids pTAU4, pORA1 and pTIK4 from Sulfolobus neozealandicus.

Bo Greve1, Susanne Jensen, Hoa Phan, Kim Brügger, Wolfram Zillig, Qunxin She, Roger A Garrett.   

Abstract

Three plasmids isolated from the crenarchaeal thermoacidophile Sulfolobus neozealandicus were characterized. Plasmids pTAU4 (7,192 bp), pORA1 (9,689 bp) and pTIK4 (13,638 bp) show unusual properties that distinguish them from previously characterized cryptic plasmids of the genus Sulfolobus. Plasmids pORA1 and pTIK4 encode RepA proteins, only the former of which carries the novel polymerase-primase domain of other known Sulfolobus plasmids. Plasmid pTAU4 encodes a mini-chromosome maintenance protein homolog and no RepA protein; the implications for DNA replication are considered. Plasmid pORA1 is the first Sulfolobus plasmid to be characterized that does not encode the otherwise highly conserved DNA-binding PlrA protein. Another encoded protein appears to be specific for the New Zealand plasmids. The three plasmids should provide useful model systems for functional studies of these important crenarchaeal proteins.

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Year:  2005        PMID: 15876565      PMCID: PMC2685554          DOI: 10.1155/2005/159218

Source DB:  PubMed          Journal:  Archaea            Impact factor:   3.273


  32 in total

1.  pING family of conjugative plasmids from the extremely thermophilic archaeon Sulfolobus islandicus: insights into recombination and conjugation in Crenarchaeota.

Authors:  K M Stedman; Q She; H Phan; I Holz; H Singh; D Prangishvili; R Garrett; W Zillig
Journal:  J Bacteriol       Date:  2000-12       Impact factor: 3.490

Review 2.  MCM proteins in DNA replication.

Authors:  B K Tye
Journal:  Annu Rev Biochem       Date:  1999       Impact factor: 23.643

3.  Rapid automatic detection and alignment of repeats in protein sequences.

Authors:  A Heger; L Holm
Journal:  Proteins       Date:  2000-11-01

4.  T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Authors:  C Notredame; D G Higgins; J Heringa
Journal:  J Mol Biol       Date:  2000-09-08       Impact factor: 5.469

5.  Genomic comparison of archaeal conjugative plasmids from Sulfolobus.

Authors:  Bo Greve; Susanne Jensen; Kim Brügger; Wolfram Zillig; Roger A Garrett
Journal:  Archaea       Date:  2004-10       Impact factor: 3.273

6.  Two different and highly organized mechanisms of translation initiation in the archaeon Sulfolobus solfataricus.

Authors:  N Tolstrup; C W Sensen; R A Garrett; I G Clausen
Journal:  Extremophiles       Date:  2000-06       Impact factor: 2.395

7.  Evolution of the family of pRN plasmids and their integrase-mediated insertion into the chromosome of the crenarchaeon Sulfolobus solfataricus.

Authors:  X Peng; I Holz; W Zillig; R A Garrett; Q She
Journal:  J Mol Biol       Date:  2000-11-03       Impact factor: 5.469

8.  Molecular analysis of pDL10 from Acidianus ambivalens reveals a family of related plasmids from extremely thermophilic and acidophilic archaea.

Authors:  A Kletzin; A Lieke; T Urich; R L Charlebois; C W Sensen
Journal:  Genetics       Date:  1999-08       Impact factor: 4.562

9.  The genetic element pSSVx of the extremely thermophilic crenarchaeon Sulfolobus is a hybrid between a plasmid and a virus.

Authors:  H P Arnold; Q She; H Phan; K Stedman; D Prangishvili; I Holz; J K Kristjansson; R Garrett; W Zillig
Journal:  Mol Microbiol       Date:  1999-10       Impact factor: 3.501

10.  Genetic profile of pNOB8 from Sulfolobus: the first conjugative plasmid from an archaeon.

Authors:  Q She; H Phan; R A Garrett; S V Albers; K M Stedman; W Zillig
Journal:  Extremophiles       Date:  1998-11       Impact factor: 2.395

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  12 in total

1.  A superfamily 3 DNA helicase encoded by plasmid pSSVi from the hyperthermophilic archaeon Sulfolobus solfataricus unwinds DNA as a higher-order oligomer and interacts with host primase.

Authors:  Xin Guo; Li Huang
Journal:  J Bacteriol       Date:  2010-01-29       Impact factor: 3.490

Review 2.  Plasmids and viruses of the thermoacidophilic crenarchaeote Sulfolobus.

Authors:  Georg Lipps
Journal:  Extremophiles       Date:  2006-01-06       Impact factor: 2.395

3.  Characterization of the transcriptional activity of the cryptic plasmid pRN1 from Sulfolobus islandicus REN1H1 and regulation of its replication operon.

Authors:  Silvia Berkner; Georg Lipps
Journal:  J Bacteriol       Date:  2006-12-15       Impact factor: 3.490

Review 4.  Archaeal extrachromosomal genetic elements.

Authors:  Haina Wang; Nan Peng; Shiraz A Shah; Li Huang; Qunxin She
Journal:  Microbiol Mol Biol Rev       Date:  2015-03       Impact factor: 11.056

5.  Two novel families of plasmids from hyperthermophilic archaea encoding new families of replication proteins.

Authors:  Nicolas Soler; Evelyne Marguet; Diego Cortez; Nicole Desnoues; Jenny Keller; Herman van Tilbeurgh; Guennadi Sezonov; Patrick Forterre
Journal:  Nucleic Acids Res       Date:  2010-04-18       Impact factor: 16.971

6.  Multiple mechanisms contribute to lateral transfer of an organophosphate degradation (opd) island in Sphingobium fuliginis ATCC 27551.

Authors:  Emmanuel Vijay Paul Pandeeti; Toshisangba Longkumer; Deviprasanna Chakka; Venkateswar Reddy Muthyala; Sunil Parthasarathy; Anil Kumar Madugundu; Sujana Ghanta; Srikanth Reddy Medipally; Surat Chameli Pantula; Harshita Yekkala; Dayananda Siddavattam
Journal:  G3 (Bethesda)       Date:  2012-12-01       Impact factor: 3.154

7.  Haloquadratum walsbyi: limited diversity in a global pond.

Authors:  Mike L Dyall-Smith; Friedhelm Pfeiffer; Kathrin Klee; Peter Palm; Karin Gross; Stephan C Schuster; Markus Rampp; Dieter Oesterhelt
Journal:  PLoS One       Date:  2011-06-20       Impact factor: 3.240

8.  DNA translocation activity of the multifunctional replication protein ORF904 from the archaeal plasmid pRN1.

Authors:  Martin Sanchez; Markus Drechsler; Holger Stark; Georg Lipps
Journal:  Nucleic Acids Res       Date:  2009-09-17       Impact factor: 16.971

9.  Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea.

Authors:  Yvan Zivanovic; Jean Armengaud; Arnaud Lagorce; Christophe Leplat; Philippe Guérin; Murielle Dutertre; Véronique Anthouard; Patrick Forterre; Patrick Wincker; Fabrice Confalonieri
Journal:  Genome Biol       Date:  2009-06-26       Impact factor: 13.583

10.  Insights into dynamics of mobile genetic elements in hyperthermophilic environments from five new Thermococcus plasmids.

Authors:  Mart Krupovic; Mathieu Gonnet; Wajdi Ben Hania; Patrick Forterre; Gaël Erauso
Journal:  PLoS One       Date:  2013-01-11       Impact factor: 3.240

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