Literature DB >> 15876368

Regulation by oligomerization in a mycobacterial folate biosynthetic enzyme.

Celia W Goulding1, Marcin I Apostol, Michael R Sawaya, Martin Phillips, Angineh Parseghian, David Eisenberg.   

Abstract

Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines and amino acids across all forms of life. Mammals uptake folate from their diets, whereas most bacteria must synthesize folate de novo. Therefore, the enzymes in the folate biosynthetic pathway are attractive drug targets against bacterial pathogens such as Mycobacterium tuberculosis, the cause of the world's most deadly infectious disease, tuberculosis (TB). M.tuberculosis 7,8-dihydroneopterin aldolase (Mtb FolB, DHNA) is the second enzyme in the folate biosynthetic pathway, which catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and glycoaldehyde. The 1.6A X-ray crystal structure of Mtb FolB complexed with its product, 6-hydroxymethyl-7,8-dihydropterin, reveals an octameric assembly similar to that seen in crystal structures of other FolB homologs. However, the 2.5A crystal structure of unliganded Mtb FolB reveals a novel tetrameric oligomerization state, with only partially formed active sites. A substrate induced conformational change appears to be necessary to convert the inactive tetramer to the active octamer. Ultracentrifugation confirmed that in solution unliganded Mtb FolB is mainly tetrameric and upon addition of substrate FolB is predominantly octameric. Kinetic analysis of substrate binding gives a Hill coefficient of 2.0, indicating positive cooperativity. We hypothesize that Mtb FolB displays cooperativity in substrate binding to regulate the cellular concentration of 7,8-dihydroneopterin, so that it may function not only as a precursor to folate but also as an antioxidant for the survival of M.tuberculosis against host defenses.

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Year:  2005        PMID: 15876368     DOI: 10.1016/j.jmb.2005.03.023

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  17 in total

1.  Characterization of a Mycobacterium tuberculosis nanocompartment and its potential cargo proteins.

Authors:  Heidi Contreras; Matthew S Joens; Lisa M McMath; Vincent P Le; Michael V Tullius; Jaqueline M Kimmey; Neda Bionghi; Marcus A Horwitz; James A J Fitzpatrick; Celia W Goulding
Journal:  J Biol Chem       Date:  2014-05-22       Impact factor: 5.157

2.  Mechanism of dihydroneopterin aldolase: functional roles of the conserved active site glutamate and lysine residues.

Authors:  Yi Wang; Yue Li; Honggao Yan
Journal:  Biochemistry       Date:  2006-12-19       Impact factor: 3.162

3.  Biochemical characterization of a dihydroneopterin aldolase used for methanopterin biosynthesis in methanogens.

Authors:  Yu Wang; Huimin Xu; Laura L Grochowski; Robert H White
Journal:  J Bacteriol       Date:  2014-06-30       Impact factor: 3.490

Review 4.  Mycobacterium tuberculosis folate metabolism and the mechanistic basis for para-aminosalicylic acid susceptibility and resistance.

Authors:  Yusuke Minato; Joshua M Thiede; Shannon Lynn Kordus; Edward J McKlveen; Breanna J Turman; Anthony D Baughn
Journal:  Antimicrob Agents Chemother       Date:  2015-06-01       Impact factor: 5.191

5.  Structural basis for the aldolase and epimerase activities of Staphylococcus aureus dihydroneopterin aldolase.

Authors:  Jaroslaw Blaszczyk; Yue Li; Jianhua Gan; Honggao Yan; Xinhua Ji
Journal:  J Mol Biol       Date:  2007-02-09       Impact factor: 5.469

6.  One substrate, five products: reactions catalyzed by the dihydroneopterin aldolase from Mycobacterium tuberculosis.

Authors:  Clarissa M Czekster; John S Blanchard
Journal:  J Am Chem Soc       Date:  2012-11-26       Impact factor: 15.419

7.  Zinc-independent folate biosynthesis: genetic, biochemical, and structural investigations reveal new metal dependence for GTP cyclohydrolase IB.

Authors:  Banumathi Sankaran; Shilah A Bonnett; Kinjal Shah; Scott Gabriel; Robert Reddy; Paul Schimmel; Dmitry A Rodionov; Valérie de Crécy-Lagard; John D Helmann; Dirk Iwata-Reuyl; Manal A Swairjo
Journal:  J Bacteriol       Date:  2009-09-18       Impact factor: 3.490

Review 8.  Advances in encapsulin nanocompartment biology and engineering.

Authors:  Jesse A Jones; Tobias W Giessen
Journal:  Biotechnol Bioeng       Date:  2020-10-01       Impact factor: 4.530

9.  An extracellular disulfide bond forming protein (DsbF) from Mycobacterium tuberculosis: structural, biochemical, and gene expression analysis.

Authors:  Nicholas Chim; Robert Riley; Juliana The; Soyeon Im; Brent Segelke; Tim Lekin; Minmin Yu; Li Wei Hung; Tom Terwilliger; Julian P Whitelegge; Celia W Goulding
Journal:  J Mol Biol       Date:  2010-01-11       Impact factor: 5.469

10.  Identification and characterization of potential therapeutic candidates in emerging human pathogen Mycobacterium abscessus: a novel hierarchical in silico approach.

Authors:  Buvaneswari Shanmugham; Archana Pan
Journal:  PLoS One       Date:  2013-03-19       Impact factor: 3.240

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