Literature DB >> 15875226

Plant and animal microRNAs: similarities and differences.

Anthony A Millar1, Peter M Waterhouse.   

Abstract

Plant and animal microRNAs (miRNAs) are evolutionarily ancient small RNAs, approximately 19-24 nucleotides in length, that are generated by cleavage from larger highly structured precursor molecules. In both plants and animals, miRNAs posttranscriptionally regulate gene expression through interactions with their target mRNAs, and these targets are often genes involved with regulating key developmental events. Despite these similarities, plant and animal miRNAs exert their control in fundamentally different ways. Generally, animal miRNAs repress gene expression by mediating translational attenuation through (multiple) miRNA-binding sites located within the 3' untranslated region of the target gene. In contrast, almost all plant miRNAs regulate their targets by directing mRNA cleavage at single sites in the coding regions. These and other differences suggest that the two systems may have originated independently, possibly as a prerequisite to the development of complex body plans.

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Year:  2005        PMID: 15875226     DOI: 10.1007/s10142-005-0145-2

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  45 in total

1.  Endogenous and silencing-associated small RNAs in plants.

Authors:  Cesar Llave; Kristin D Kasschau; Maggie A Rector; James C Carrington
Journal:  Plant Cell       Date:  2002-07       Impact factor: 11.277

2.  RNA silencing bridging the gaps in wheat extracts.

Authors:  Olivier Voinnet
Journal:  Trends Plant Sci       Date:  2003-07       Impact factor: 18.313

3.  MicroRNAs and small interfering RNAs can inhibit mRNA expression by similar mechanisms.

Authors:  Yan Zeng; Rui Yi; Bryan R Cullen
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-05       Impact factor: 11.205

4.  The small RNA profile during Drosophila melanogaster development.

Authors:  Alexei A Aravin; Mariana Lagos-Quintana; Abdullah Yalcin; Mihaela Zavolan; Debora Marks; Ben Snyder; Terry Gaasterland; Jutta Meyer; Thomas Tuschl
Journal:  Dev Cell       Date:  2003-08       Impact factor: 12.270

5.  A large imprinted microRNA gene cluster at the mouse Dlk1-Gtl2 domain.

Authors:  Hervé Seitz; Hélène Royo; Marie-Line Bortolin; Shau-Ping Lin; Anne C Ferguson-Smith; Jérôme Cavaillé
Journal:  Genome Res       Date:  2004-08-12       Impact factor: 9.043

6.  Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.

Authors:  Benjamin P Lewis; Christopher B Burge; David P Bartel
Journal:  Cell       Date:  2005-01-14       Impact factor: 41.582

7.  An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans.

Authors:  N C Lau; L P Lim; E G Weinstein; D P Bartel
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

8.  Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA.

Authors:  Cesar Llave; Zhixin Xie; Kristin D Kasschau; James C Carrington
Journal:  Science       Date:  2002-09-20       Impact factor: 47.728

9.  Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genes.

Authors:  Milo J Aukerman; Hajime Sakai
Journal:  Plant Cell       Date:  2003-10-10       Impact factor: 11.277

10.  In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA.

Authors:  Eneida Abreu Parizotto; Patrice Dunoyer; Nadia Rahm; Christophe Himber; Olivier Voinnet
Journal:  Genes Dev       Date:  2004-09-01       Impact factor: 11.361

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  72 in total

1.  "Hypothesis for the modern RNA world": a pervasive non-coding RNA-based genetic regulation is a prerequisite for the emergence of multicellular complexity.

Authors:  Irma Lozada-Chávez; Peter F Stadler; Sonja J Prohaska
Journal:  Orig Life Evol Biosph       Date:  2012-02-10       Impact factor: 1.950

2.  Flanking region sequence information to refine microRNA target predictions.

Authors:  Russiachand Heikham; Ravi Shankar
Journal:  J Biosci       Date:  2010-03       Impact factor: 1.826

3.  The novel 172 sheep (Ovis aries) microRNAs and their targets.

Authors:  Muhammad Younas Khan Barozai
Journal:  Mol Biol Rep       Date:  2012-05       Impact factor: 2.316

4.  Unique folding of precursor microRNAs: quantitative evidence and implications for de novo identification.

Authors:  Stanley Ng Kwang Loong; Santosh K Mishra
Journal:  RNA       Date:  2006-12-28       Impact factor: 4.942

Review 5.  On the origin and functions of RNA-mediated silencing: from protists to man.

Authors:  Heriberto Cerutti; J Armando Casas-Mollano
Journal:  Curr Genet       Date:  2006-05-12       Impact factor: 3.886

Review 6.  Dicer-like (DCL) proteins in plants.

Authors:  Qingpo Liu; Ying Feng; Zhujun Zhu
Journal:  Funct Integr Genomics       Date:  2009-02-17       Impact factor: 3.410

Review 7.  RNA silencing in plants: yesterday, today, and tomorrow.

Authors:  Andrew Eamens; Ming-Bo Wang; Neil A Smith; Peter M Waterhouse
Journal:  Plant Physiol       Date:  2008-06       Impact factor: 8.340

Review 8.  Biogenesis of small RNAs in animals.

Authors:  V Narry Kim; Jinju Han; Mikiko C Siomi
Journal:  Nat Rev Mol Cell Biol       Date:  2009-02       Impact factor: 94.444

9.  Feminized tassels of maize mop1 and ts1 mutants exhibit altered levels of miR156 and specific SBP-box genes.

Authors:  Judd F Hultquist; Jane E Dorweiler
Journal:  Planta       Date:  2008-09-18       Impact factor: 4.116

Review 10.  Reconstruction of Arabidopsis thaliana fully integrated small RNA pathway.

Authors:  Sadegh Azimzadeh Jamalkandi; Ali Masoudi-Nejad
Journal:  Funct Integr Genomics       Date:  2009-11       Impact factor: 3.410

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