Literature DB >> 15871254

Practical considerations on the use of predictive models for regulatory purposes.

Jay Tunkel1, Kelly Mayo, Carlye Austin, Amy Hickerson, Philip Howard.   

Abstract

Interest in the use of quantitative structure-activity relationships (QSARs) for regulatory purposes has been growing steadily over the years, and many models have been evaluated under the guidance and acceptability criteria defined at the Setubal workshop held in March 2002. This work explores some of the practical issues related to the use of QSARs for regulatory purposes using results obtained from rat oral lethality and fish acute toxicity estimates generated from computational models (including TOPKAT, MCASE, OASIS, and ECOSAR). Using data submitted under the Environmental Protection Agency's (EPA's) High Production Volume (HPV) Challenge Program, the results on the quality of the estimations are compared using a standard statistical review and an additional classification approach in which the hazard predictions were grouped using well-defined regulatory criteria (those used in EPA's New Chemical Program). Our results indicate that an evaluation of a model's regulatory applicability and predictive power is ultimately dependent on the specific criteria used in the assessment process. This work also discusses the practical difficulties associated with defining the domain of a predictive model using the estimates of four different ready biodegradation models and experimental data submitted under the EPA's New Chemical program. Our results suggest that the method a model employs for its predictions is as important as the training set in determining its domain of applicability. Together, these results highlight the challenges associated with developing reliable and easily applied acceptability criteria for the regulatory use of QSAR models.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15871254     DOI: 10.1021/es049220t

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  10 in total

1.  Ecotoxicological modeling and risk assessment using chemometric tools.

Authors:  Kunal Roy
Journal:  Mol Divers       Date:  2006-05       Impact factor: 2.943

Review 2.  Computer-aided drug discovery and development (CADDD): in silico-chemico-biological approach.

Authors:  I M Kapetanovic
Journal:  Chem Biol Interact       Date:  2006-12-16       Impact factor: 5.192

3.  QSAR modeling: where have you been? Where are you going to?

Authors:  Artem Cherkasov; Eugene N Muratov; Denis Fourches; Alexandre Varnek; Igor I Baskin; Mark Cronin; John Dearden; Paola Gramatica; Yvonne C Martin; Roberto Todeschini; Viviana Consonni; Victor E Kuz'min; Richard Cramer; Romualdo Benigni; Chihae Yang; James Rathman; Lothar Terfloth; Johann Gasteiger; Ann Richard; Alexander Tropsha
Journal:  J Med Chem       Date:  2014-01-06       Impact factor: 7.446

4.  Acute aquatic toxicity of organic solvents modeled by QSARs.

Authors:  A Levet; C Bordes; Y Clément; P Mignon; C Morell; H Chermette; P Marote; P Lantéri
Journal:  J Mol Model       Date:  2016-11-09       Impact factor: 1.810

5.  In silico prediction of pesticide aquatic toxicity with chemical category approaches.

Authors:  Fuxing Li; Defang Fan; Hao Wang; Hongbin Yang; Weihua Li; Yun Tang; Guixia Liu
Journal:  Toxicol Res (Camb)       Date:  2017-07-31       Impact factor: 3.524

Review 6.  In Silico Models for Predicting Acute Systemic Toxicity.

Authors:  Ivanka Tsakovska; Antonia Diukendjieva; Andrew P Worth
Journal:  Methods Mol Biol       Date:  2022

Review 7.  Predictive in silico studies of human 5-hydroxytryptamine receptor subtype 2B (5-HT2B) and valvular heart disease.

Authors:  Terry-Elinor Reid; Krishna Kumar; Xiang Simon Wang
Journal:  Curr Top Med Chem       Date:  2013       Impact factor: 3.295

8.  3D QSAR studies of hydroxylated polychlorinated biphenyls as potential xenoestrogens.

Authors:  Patricia Ruiz; Kundan Ingale; John S Wheeler; Moiz Mumtaz
Journal:  Chemosphere       Date:  2015-11-19       Impact factor: 7.086

9.  Structure-activity models of oral clearance, cytotoxicity, and LD50: a screen for promising anticancer compounds.

Authors:  John C Boik; Robert A Newman
Journal:  BMC Pharmacol       Date:  2008-06-13

10.  Prediction of acute mammalian toxicity using QSAR methods: a case study of sulfur mustard and its breakdown products.

Authors:  Patricia Ruiz; Gino Begluitti; Terry Tincher; John Wheeler; Moiz Mumtaz
Journal:  Molecules       Date:  2012-07-27       Impact factor: 4.411

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.