Literature DB >> 15870451

Allosteric NADP-glutamate dehydrogenase from aspergilli: purification, characterization and implications for metabolic regulation at the carbon-nitrogen interface.

Shahid Noor1, Narayan S Punekar.   

Abstract

NADP-dependent glutamate dehydrogenase (NADP-GDH) mediates fungal ammonium assimilation through reductive synthesis of glutamate from 2-oxoglutarate. By virtue of its position at the interface of carbon and nitrogen metabolism, biosynthetic NADP-GDH is a potential candidate for metabolic control. In order to facilitate characterization, a new and effective dye-affinity method was devised to purify NADP-GDH from two aspergilli, Aspergillus niger and Aspergillus nidulans. The A. niger NADP-GDH was characterized at length and its kinetic interaction constants with glutamate (Km 34.7 mM) and ammonium (Km 1.05 mM; Ki 0.4 mM) were consistent with an anabolic role. Isophthalate, 2-methyleneglutarate and 2,4-pyridinedicarboxylate were significant inhibitors, with respective Ki values of 6.9, 9.2 and 202.0 microM. The A. niger enzyme showed allosteric properties and a sigmoid response (nH=2.5) towards 2-oxoglutarate saturation. The co-operative behaviour was a feature common to NADP-GDH from Aspergillus awamori, A. nidulans and Aspergillus oryzae. NADP-GDH may therefore be a crucial determinant in adjusting 2-oxoglutarate flux between the tricarboxylic acid cycle and glutamate biosynthesis in aspergilli.

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Year:  2005        PMID: 15870451     DOI: 10.1099/mic.0.27751-0

Source DB:  PubMed          Journal:  Microbiology        ISSN: 1350-0872            Impact factor:   2.777


  13 in total

1.  Changes in nitrogen assimilation, metabolism, and growth in transgenic rice plants expressing a fungal NADP(H)-dependent glutamate dehydrogenase (gdhA).

Authors:  Tomomi Abiko; Masataka Wakayama; Akira Kawakami; Mitsuhiro Obara; Hiroaki Kisaka; Tetsuya Miwa; Naohiro Aoki; Ryu Ohsugi
Journal:  Planta       Date:  2010-05-05       Impact factor: 4.116

2.  Purification, crystallization and preliminary X-ray diffraction analysis of NADP-dependent glutamate dehydrogenase from Aspergillus niger.

Authors:  Prem Prakash; Adhish S Walvekar; Narayan S Punekar; Prasenjit Bhaumik
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-10-25       Impact factor: 1.056

3.  Structural basis for leucine-induced allosteric activation of glutamate dehydrogenase.

Authors:  Takeo Tomita; Tomohisa Kuzuyama; Makoto Nishiyama
Journal:  J Biol Chem       Date:  2011-09-06       Impact factor: 5.157

4.  Structural basis for the catalytic mechanism and α-ketoglutarate cooperativity of glutamate dehydrogenase.

Authors:  Prem Prakash; Narayan S Punekar; Prasenjit Bhaumik
Journal:  J Biol Chem       Date:  2018-03-14       Impact factor: 5.157

5.  Molecular cloning, characterization and function analysis of a GDH gene from Sclerotinia sclerotiorum in rice.

Authors:  Changqing Du; Jianzhong Lin; Yuanzhu Yang; Hong Liu; Chiyu Li; Yanbiao Zhou; Yixing Li; Dongying Tang; Xiaoying Zhao; Yonghua Zhu; Xuanming Liu
Journal:  Mol Biol Rep       Date:  2014-02-21       Impact factor: 2.316

6.  Over-expression of a glutamate dehydrogenase gene, MgGDH, from Magnaporthe grisea confers tolerance to dehydration stress in transgenic rice.

Authors:  Yanbiao Zhou; Caisheng Zhang; Jianzhong Lin; Yuanzhu Yang; Yuchong Peng; Dongying Tang; Xiaoying Zhao; Yonghua Zhu; Xuanming Liu
Journal:  Planta       Date:  2014-12-09       Impact factor: 4.116

7.  Impact of ammonium permeases mepA, mepB, and mepC on nitrogen-regulated secondary metabolism in Fusarium fujikuroi.

Authors:  Sabine Teichert; Julian C Rutherford; Marieke Wottawa; Joseph Heitman; Bettina Tudzynski
Journal:  Eukaryot Cell       Date:  2007-12-14

8.  Expression of Lactate Dehydrogenase in Aspergillus niger for L-Lactic Acid Production.

Authors:  Khyati K Dave; Narayan S Punekar
Journal:  PLoS One       Date:  2015-12-18       Impact factor: 3.240

9.  Mixed disulfide formation at Cys141 leads to apparent unidirectional attenuation of Aspergillus niger NADP-glutamate dehydrogenase activity.

Authors:  Adhish S Walvekar; Rajarshi Choudhury; Narayan S Punekar
Journal:  PLoS One       Date:  2014-07-02       Impact factor: 3.240

10.  Comparative proteomic analysis of different developmental stages of the edible mushroom Termitomyces heimii.

Authors:  Norasfaliza Rahmad; Jameel R Al-Obaidi; Noraswati Mohd Nor Rashid; Ng Boon Zean; Mohd Hafis Yuswan Mohd Yusoff; Nur Syahidah Shaharuddin; Nor Azreen Mohd Jamil; Norihan Mohd Saleh
Journal:  Biol Res       Date:  2014-07-03       Impact factor: 5.612

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