Literature DB >> 15865063

Quantitative structure-activity relationships of mutagenic activity from quantum topological descriptors: triazenes and halogenated hydroxyfuranones (mutagen-X) derivatives.

P L A Popelier1, P J Smith, U A Chaudry.   

Abstract

The mutagenic activity of 23 triazenes and, in a different set, of 24 halogenated hydroxyfuranones (MX derivatives) is quantitatively related to new features of contemporary molecular wave functions. Nowadays affordable computers are powerful enough to rapidly generate geometry-optimised ab initio wave functions at HF/3-21G*, HF/6-31G* and B3LYP/6-311 + G(2d,p) level for all molecules. The bonds of a common molecular skeleton are described by their ab initio bond lengths and local properties provided by the theory of quantum chemical topology (QCT). The chemometric analysis involves two types: one to generate a statistically validated quantitative model, and one to isolate the active center. In the former a genetic algorithm (GA) selects bond descriptors in order to optimise the cross-validation error, q2, followed by a full partial least squares (PLS) analysis, which also yields randomisation statistics. In the latter type principal components (PCs) are constructed from the original bond descriptors and their variables important to the projection (VIPs) are plotted in a histogram. This analysis suggests a preferred mechanistic pathway for the initial hydroxylation of the triazenes, an issue that has remained ambiguous so far. In the case of the hydroxyfuranones the proposed method aids the elucidation of a mechanistic ambivalence.

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Year:  2004        PMID: 15865063     DOI: 10.1007/s10822-004-6815-7

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  13 in total

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5.  On the mutagenicity of MX compounds.

Authors:  K Tuppurainen; S Lötjönen
Journal:  Mutat Res       Date:  1993-06       Impact factor: 2.433

6.  Ames test of 1-(X-phenyl)-3,3-dialkyltriazenes. A quantitative structure-activity study.

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7.  Revised methods for the Salmonella mutagenicity test.

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10.  Quantitative structure-activity relationships from optimised ab initio bond lengths: steroid binding affinity and antibacterial activity of nitrofuran derivatives.

Authors:  P J Smith; P L A Popelier
Journal:  J Comput Aided Mol Des       Date:  2004-02       Impact factor: 3.686

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  2 in total

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2.  Global and local chemical reactivities of mutagen X and simple derivatives.

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Journal:  J Mol Model       Date:  2013-03-06       Impact factor: 1.810

  2 in total

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