Literature DB >> 15864469

Genetic evidence of postglacial population expansion in Puget Sound rockfish (Sebastes emphaeus).

Erik E Sotka1, Jennifer A Hempelmann, Christiane H Biermann.   

Abstract

Several rockfish species (genus Sebastes) along the northeastern Pacific Ocean have rapidly declined in abundance owing in part to overfishing. A striking exception is the dwarf-like Puget Sound rockfish Sebastes emphaeus, whose densities have increased by several orders of magnitude over the last several decades. To describe their genetic structure, we sequenced 395 bp from the mitochondrial control region of 128 S. emphaeus adults from 5 locations spanning approximately 120 km of the Northwest Straits of Washington state. We detected no significant genetic differentiation among these populations and substantial genetic variation within populations, a pattern that may indicate high levels of ongoing gene flow. Preliminary data from 2 microsatellite loci are also consistent with panmixia. The mtDNA sequences also suggest that Puget Sound rockfish populations have expanded substantially since the retreat of Pleistocene glaciers made habitat in Puget Sound region available approximately 12,000 years ago.

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Year:  2005        PMID: 15864469     DOI: 10.1007/s10126-004-0437-x

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.619


  10 in total

1.  Evolution of a mitochondrial cytochrome b gene sequence in the species-rich genus sebastes (Teleostei, Scorpaenidae) and its utility in testing the monophyly of the subgenus Sebastomus.

Authors:  A Rocha-Olivares; C A Kimbrell; B J Eitner; R D Vetter
Journal:  Mol Phylogenet Evol       Date:  1999-04       Impact factor: 4.286

2.  MEGA2: molecular evolutionary genetics analysis software.

Authors:  S Kumar; K Tamura; I B Jakobsen; M Nei
Journal:  Bioinformatics       Date:  2001-12       Impact factor: 6.937

3.  Population growth makes waves in the distribution of pairwise genetic differences.

Authors:  A R Rogers; H Harpending
Journal:  Mol Biol Evol       Date:  1992-05       Impact factor: 16.240

4.  Analysis of microsatellite DNA polymorphisms in rockfish Sebastes thompsoni and application to population genetics studies.

Authors:  M Sekino; N Takagi; M Hara; H Takahashi
Journal:  Mar Biotechnol (NY)       Date:  2001-01       Impact factor: 3.619

5.  Monophyletic origin of Lake Victoria cichlid fishes suggested by mitochondrial DNA sequences.

Authors:  A Meyer; T D Kocher; P Basasibwaki; A C Wilson
Journal:  Nature       Date:  1990-10-11       Impact factor: 49.962

6.  MODELTEST: testing the model of DNA substitution.

Authors:  D Posada; K A Crandall
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

7.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

8.  Similar morphologies of cichlid fish in Lakes Tanganyika and Malawi are due to convergence.

Authors:  T D Kocher; J A Conroy; K R McKaye; J R Stauffer
Journal:  Mol Phylogenet Evol       Date:  1993-06       Impact factor: 4.286

9.  Isolation and Characterization of Twelve Microsatellite Loci for Rockfish (Sebastes).

Authors: 
Journal:  Mar Biotechnol (NY)       Date:  1999-05       Impact factor: 3.619

10.  Demographic history of Diadema antillarum, a keystone herbivore on Caribbean reefs.

Authors:  H A Lessios; M J Garrido; B D Kessing
Journal:  Proc Biol Sci       Date:  2001-11-22       Impact factor: 5.349

  10 in total
  2 in total

1.  Demographic expansion and subtle differentiation in the long-tailed hake Macruronus magellanicus: evidence from microsatellite data.

Authors:  María Eugenia D'Amato
Journal:  Mar Biotechnol (NY)       Date:  2006-02-28       Impact factor: 3.619

2.  Phylogenetic relationships of South China Sea snappers (genus Lutjanus; family Lutjanidae) based on mitochondrial DNA sequences.

Authors:  Yusong Guo; Zhongduo Wang; Chuwu Liu; Li Liu; Yun Liu
Journal:  Mar Biotechnol (NY)       Date:  2007-10-02       Impact factor: 3.619

  2 in total

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