Literature DB >> 15861792

A better global resolution function and a novel iterative stochastic search method for optimization of high-performance liquid chromatographic separation.

Yandi Dharmadi1, Ramon Gonzalez.   

Abstract

HPLC optimization strategy consists of four elements; experimental design, retention modeling, quality criteria function, and optimum search method. In this paper we present a simple, superior alternative to general classes of classical resolution functions (S function) and a novel optimum search algorithm (iterative stochastic search, ISS) for HPLC optimization. Comparison of S with general classes of resolution-based quality criteria functions (Rs, Rp, and Rmin) shows superior features such as correct assessment of favorable separation conditions, preservation of peak pair contributions, elimination of arbitrary cut-off values, and a unique capability to interpret absolute significance of function values through a simple inequality. The proposed ISS algorithm is more robust than standard methods and it is easily applicable to hyperdimensional optimization. ISS also shows clear advantages in its ability to correctly identify the global optimum (instead of local optimum), with higher precision, with more efficient use of computation cycles, and with easier implementation. Successful application of S and ISS to HPLC optimization was demonstrated in the separation of representative functionalities (sugars, alcohols, and organic acids) present in microbial fermentations. Both the optimal and pathological (worst) conditions were successfully predicted and experimentally verified.

Entities:  

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Year:  2005        PMID: 15861792     DOI: 10.1016/j.chroma.2005.02.075

Source DB:  PubMed          Journal:  J Chromatogr A        ISSN: 0021-9673            Impact factor:   4.759


  11 in total

1.  Engineered reversal of the β-oxidation cycle for the synthesis of fuels and chemicals.

Authors:  Clementina Dellomonaco; James M Clomburg; Elliot N Miller; Ramon Gonzalez
Journal:  Nature       Date:  2011-08-10       Impact factor: 49.962

2.  Escherichia coli strains engineered for homofermentative production of D-lactic acid from glycerol.

Authors:  Suman Mazumdar; James M Clomburg; Ramon Gonzalez
Journal:  Appl Environ Microbiol       Date:  2010-05-14       Impact factor: 4.792

3.  Engineered respiro-fermentative metabolism for the production of biofuels and biochemicals from fatty acid-rich feedstocks.

Authors:  Clementina Dellomonaco; Carlos Rivera; Paul Campbell; Ramon Gonzalez
Journal:  Appl Environ Microbiol       Date:  2010-06-04       Impact factor: 4.792

4.  Multi-factorial engineering of heterologous polyketide production in Escherichia coli reveals complex pathway interactions.

Authors:  Brett A Boghigian; Haoran Zhang; Blaine A Pfeifer
Journal:  Biotechnol Bioeng       Date:  2011-02-24       Impact factor: 4.530

5.  Metabolic analysis of wild-type Escherichia coli and a pyruvate dehydrogenase complex (PDHC)-deficient derivative reveals the role of PDHC in the fermentative metabolism of glucose.

Authors:  Abhishek Murarka; James M Clomburg; Sean Moran; Jacqueline V Shanks; Ramon Gonzalez
Journal:  J Biol Chem       Date:  2010-07-28       Impact factor: 5.157

6.  Fermentative utilization of glycerol by Escherichia coli and its implications for the production of fuels and chemicals.

Authors:  Abhishek Murarka; Yandi Dharmadi; Syed Shams Yazdani; Ramon Gonzalez
Journal:  Appl Environ Microbiol       Date:  2007-12-21       Impact factor: 4.792

7.  Anaerobic fermentation of glycerol in Paenibacillus macerans: metabolic pathways and environmental determinants.

Authors:  Ashutosh Gupta; Abhishek Murarka; Paul Campbell; Ramon Gonzalez
Journal:  Appl Environ Microbiol       Date:  2009-07-17       Impact factor: 4.792

8.  Synthesis of methyl ketones by metabolically engineered Escherichia coli.

Authors:  John Park; María Rodríguez-Moyá; Mai Li; Eran Pichersky; Ka-Yiu San; Ramon Gonzalez
Journal:  J Ind Microbiol Biotechnol       Date:  2012-08-01       Impact factor: 3.346

9.  Presence of glucose, xylose, and glycerol fermenting bacteria in the deep biosphere of the former Homestake gold mine, South Dakota.

Authors:  Gurdeep Rastogi; Raghu N Gurram; Aditya Bhalla; Ramon Gonzalez; Kenneth M Bischoff; Stephen R Hughes; Sudhir Kumar; Rajesh K Sani
Journal:  Front Microbiol       Date:  2013-02-15       Impact factor: 5.640

10.  Efficient synthesis of L-lactic acid from glycerol by metabolically engineered Escherichia coli.

Authors:  Suman Mazumdar; Matthew D Blankschien; James M Clomburg; Ramon Gonzalez
Journal:  Microb Cell Fact       Date:  2013-01-25       Impact factor: 5.328

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