Literature DB >> 15849240

The effect of branching on the critical concentration and average filament length of actin.

A E Carlsson1.   

Abstract

The dependences of the steady-state critical concentration and average filament length of actin solutions, on the filament branching and capping rates, are calculated using a rate methodology based on the total number of actin filaments. The methodology generalizes calculations of the "treadmilling" actin concentration at which an average filament has net zero growth rate. The predictions of the rate methodology are validated by comparison with stochastic-growth simulations that track the positions of all filament subunits over time. For side branching, the critical concentration drops proportionally to the square root of the branching rate; for end branching the drop is linear. The polymerization response to branching has a maximum as a function of the capping-protein concentration. The average filament length drops with increasing branching, because the critical concentration drops. Even small rates of filament uncapping have a large impact on the average filament length in vitro. The potential significance of these phenomena for cell behavior is evaluated.

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Year:  2005        PMID: 15849240      PMCID: PMC1366511          DOI: 10.1529/biophysj.105.061598

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

1.  Reconstitution of actin-based motility of Listeria and Shigella using pure proteins.

Authors:  T P Loisel; R Boujemaa; D Pantaloni; M F Carlier
Journal:  Nature       Date:  1999-10-07       Impact factor: 49.962

2.  The Arp2/3 complex branches filament barbed ends: functional antagonism with capping proteins.

Authors:  D Pantaloni; R Boujemaa; D Didry; P Gounon; M F Carlier
Journal:  Nat Cell Biol       Date:  2000-07       Impact factor: 28.824

3.  Single-molecule speckle analysis of actin filament turnover in lamellipodia.

Authors:  Naoki Watanabe; Timothy J Mitchison
Journal:  Science       Date:  2002-02-08       Impact factor: 47.728

4.  The Arp2/3 complex nucleates actin filament branches from the sides of pre-existing filaments.

Authors:  K J Amann; T D Pollard
Journal:  Nat Cell Biol       Date:  2001-03       Impact factor: 28.824

5.  Direct observation of dendritic actin filament networks nucleated by Arp2/3 complex and WASP/Scar proteins.

Authors:  L Blanchoin; K J Amann; H N Higgs; J B Marchand; D A Kaiser; T D Pollard
Journal:  Nature       Date:  2000-04-27       Impact factor: 49.962

6.  Cofilin produces newly polymerized actin filaments that are preferred for dendritic nucleation by the Arp2/3 complex.

Authors:  Ilia Ichetovkin; Wayne Grant; John Condeelis
Journal:  Curr Biol       Date:  2002-01-08       Impact factor: 10.834

Review 7.  Regulation of actin filament network formation through ARP2/3 complex: activation by a diverse array of proteins.

Authors:  H N Higgs; T D Pollard
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

8.  Cortactin promotes and stabilizes Arp2/3-induced actin filament network formation.

Authors:  A M Weaver; A V Karginov; A W Kinley; S A Weed; Y Li; J T Parsons; J A Cooper
Journal:  Curr Biol       Date:  2001-03-06       Impact factor: 10.834

9.  Influence of the C terminus of Wiskott-Aldrich syndrome protein (WASp) and the Arp2/3 complex on actin polymerization.

Authors:  H N Higgs; L Blanchoin; T D Pollard
Journal:  Biochemistry       Date:  1999-11-16       Impact factor: 3.162

Review 10.  Molecular mechanisms controlling actin filament dynamics in nonmuscle cells.

Authors:  T D Pollard; L Blanchoin; R D Mullins
Journal:  Annu Rev Biophys Biomol Struct       Date:  2000
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  7 in total

1.  Optimal orientation in branched cytoskeletal networks.

Authors:  D A Quint; J M Schwarz
Journal:  J Math Biol       Date:  2010-12-08       Impact factor: 2.259

2.  Stimulation of actin polymerization by filament severing.

Authors:  A E Carlsson
Journal:  Biophys J       Date:  2005-10-28       Impact factor: 4.033

3.  Energetics and dynamics of constrained actin filament bundling.

Authors:  Le Yang; David Sept; A E Carlsson
Journal:  Biophys J       Date:  2006-03-24       Impact factor: 4.033

4.  Stochastic simulation of actin dynamics reveals the role of annealing and fragmentation.

Authors:  Joseph Fass; Chi Pak; James Bamburg; Alex Mogilner
Journal:  J Theor Biol       Date:  2008-01-11       Impact factor: 2.691

Review 5.  Emergent complexity of the cytoskeleton: from single filaments to tissue.

Authors:  F Huber; J Schnauß; S Rönicke; P Rauch; K Müller; C Fütterer; J Käs
Journal:  Adv Phys       Date:  2013-03-06       Impact factor: 25.375

6.  Actin polymerization overshoots induced by plus-end capping.

Authors:  F J Brooks; A E Carlsson
Journal:  Phys Biol       Date:  2010-01-20       Impact factor: 2.583

7.  Nonequilibrium actin polymerization treated by a truncated rate-equation method.

Authors:  F J Brooks; A E Carlsson
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-03-24
  7 in total

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