Literature DB >> 15841344

Intraspecific comparative analysis of the species Salinibacter ruber.

Arantxa Peña1, Maria Valens, Fernando Santos, Sandra Buczolits, Josefa Antón, Peter Kämpfer, Hans-Jürgen Busse, Rudolf Amann, Ramon Rosselló-Mora.   

Abstract

Salinibacter ruber is the first extremely halophilic member of the Bacteria domain of proven environmental relevance in hypersaline brines at or approaching NaCl saturation, that has been brought to pure culture. A collection of 17 strains isolated from five different geographical locations (Mallorca, Alicante, Ebro Delta, Canary Islands, and Peruvian Andes) were studied following the currently accepted taxonomic approach. Additionally, random amplification of genomic DNA led to the phenetic analysis of the intraspecific diversity. Altogether the taxonomic study indicated that S. ruber remained highly homogeneous beyond any geographical barrier. However, genomic fingerprints indicated that populations from different isolation sites could still be discriminated.

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Year:  2005        PMID: 15841344     DOI: 10.1007/s00792-005-0430-y

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  31 in total

1.  Intracellular ion and organic solute concentrations of the extremely halophilic bacterium Salinibacter ruber.

Authors:  Aharon Oren; Mikal Heldal; Svein Norland; Erwin A Galinski
Journal:  Extremophiles       Date:  2002-08-24       Impact factor: 2.395

2.  ARB: a software environment for sequence data.

Authors:  Wolfgang Ludwig; Oliver Strunk; Ralf Westram; Lothar Richter; Harald Meier; Arno Buchner; Tina Lai; Susanne Steppi; Gangolf Jobb; Wolfram Förster; Igor Brettske; Stefan Gerber; Anton W Ginhart; Oliver Gross; Silke Grumann; Stefan Hermann; Ralf Jost; Andreas König; Thomas Liss; Ralph Lüssmann; Michael May; Björn Nonhoff; Boris Reichel; Robert Strehlow; Alexandros Stamatakis; Norbert Stuckmann; Alexander Vilbig; Michael Lenke; Thomas Ludwig; Arndt Bode; Karl-Heinz Schleifer
Journal:  Nucleic Acids Res       Date:  2004-02-25       Impact factor: 16.971

3.  Archaea in coastal marine environments.

Authors:  E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

4.  TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment.

Authors:  Y Van de Peer; R De Wachter
Journal:  Comput Appl Biosci       Date:  1994-09

5.  Halobacterial megaplasmids are negatively supercoiled.

Authors:  P López-García; J Antón; J P Abad; R Amils
Journal:  Mol Microbiol       Date:  1994-02       Impact factor: 3.501

6.  Analysis of genotypic diversity and relationships among Pseudomonas stutzeri strains by PCR-based genomic fingerprinting and multilocus enzyme electrophoresis.

Authors:  J Sikorski; R Rosselló-Mora; M G Lorenz
Journal:  Syst Appl Microbiol       Date:  1999-09       Impact factor: 4.022

7.  The contribution of halophilic Bacteria to the red coloration of saltern crystallizer ponds(1).

Authors:  A Oren; F Rodríguez-Valera
Journal:  FEMS Microbiol Ecol       Date:  2001-07       Impact factor: 4.194

8.  Salinibacter ruber gen. nov., sp. nov., a novel, extremely halophilic member of the Bacteria from saltern crystallizer ponds.

Authors:  Josefa Antón; Aharon Oren; Susana Benlloch; Francisco Rodríguez-Valera; Rudolf Amann; Ramón Rosselló-Mora
Journal:  Int J Syst Evol Microbiol       Date:  2002-03       Impact factor: 2.747

9.  Amino acid composition of bulk protein and salt relationships of selected enzymes of Salinibacter ruber, an extremely halophilic bacterium.

Authors:  Aharon Oren; Lili Mana
Journal:  Extremophiles       Date:  2002-02-01       Impact factor: 2.395

10.  Diversity of free-living and attached bacteria in offshore Western Mediterranean waters as depicted by analysis of genes encoding 16S rRNA.

Authors:  S G Acinas; J Antón; F Rodríguez-Valera
Journal:  Appl Environ Microbiol       Date:  1999-02       Impact factor: 4.792

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  10 in total

1.  Chromophore interaction in xanthorhodopsin--retinal dependence of salinixanthin binding.

Authors:  Eleonora S Imasheva; Sergei P Balashov; Jennifer M Wang; Elena Smolensky; Mordechai Sheves; Janos K Lanyi
Journal:  Photochem Photobiol       Date:  2008-04-09       Impact factor: 3.421

2.  Xanthorhodopsin: a bacteriorhodopsin-like proton pump with a carotenoid antenna.

Authors:  Janos K Lanyi; Sergei P Balashov
Journal:  Biochim Biophys Acta       Date:  2008-05-16

3.  Functions of carotenoids in xanthorhodopsin and archaerhodopsin, from action spectra of photoinhibition of cell respiration.

Authors:  Vladimir A Boichenko; Jennifer M Wang; Josefa Antón; Janos K Lanyi; Sergei P Balashov
Journal:  Biochim Biophys Acta       Date:  2006-08-30

4.  Xanthorhodopsin: a proton pump with a light-harvesting carotenoid antenna.

Authors:  Sergei P Balashov; Eleonora S Imasheva; Vladimir A Boichenko; Josefa Antón; Jennifer M Wang; Janos K Lanyi
Journal:  Science       Date:  2005-09-23       Impact factor: 47.728

5.  High metabolomic microdiversity within co-occurring isolates of the extremely halophilic bacterium Salinibacter ruber.

Authors:  Josefa Antón; Marianna Lucio; Arantxa Peña; Ana Cifuentes; Jocelyn Brito-Echeverría; Franco Moritz; Dimitrios Tziotis; Cristina López; Mercedes Urdiain; Philippe Schmitt-Kopplin; Ramon Rosselló-Móra
Journal:  PLoS One       Date:  2013-05-31       Impact factor: 3.240

6.  Distribution, abundance and diversity of the extremely halophilic bacterium Salinibacter ruber.

Authors:  Josefa Antón; Arantxa Peña; Fernando Santos; Manuel Martínez-García; Philippe Schmitt-Kopplin; Ramon Rosselló-Mora
Journal:  Saline Systems       Date:  2008-10-28

7.  Genome Analysis of a New Rhodothermaceae Strain Isolated from a Hot Spring.

Authors:  Kian Mau Goh; Kok-Gan Chan; Soon Wee Lim; Kok Jun Liew; Chia Sing Chan; Mohd Shahir Shamsir; Robson Ee; Tan-Guan-Sheng Adrian
Journal:  Front Microbiol       Date:  2016-07-14       Impact factor: 5.640

8.  Characterization of ecologically diverse viruses infecting co-occurring strains of cosmopolitan hyperhalophilic Bacteroidetes.

Authors:  Judith Villamor; María Dolores Ramos-Barbero; Pedro González-Torres; Toni Gabaldón; Ramón Rosselló-Móra; Inmaculada Meseguer; Manuel Martínez-García; Fernando Santos; Josefa Antón
Journal:  ISME J       Date:  2017-11-03       Impact factor: 11.217

9.  Genome Variation in the Model Halophilic Bacterium Salinibacter ruber.

Authors:  Pedro González-Torres; Toni Gabaldón
Journal:  Front Microbiol       Date:  2018-07-19       Impact factor: 5.640

10.  Metabolomic Investigations on Nesterenkonia flava Revealed Significant Differences between Marine and Terrestrial Actinomycetes.

Authors:  Chun-Lan Xie; Jin-Mei Xia; Jun-Song Wang; Dong-Hai Lin; Xian-Wen Yang
Journal:  Mar Drugs       Date:  2018-09-30       Impact factor: 5.118

  10 in total

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