Literature DB >> 15840809

Prp8 protein: at the heart of the spliceosome.

Richard J Grainger1, Jean D Beggs.   

Abstract

Pre-messenger RNA (pre-mRNA) splicing is a central step in gene expression. Lying between transcription and protein synthesis, pre-mRNA splicing removes sequences (introns) that would otherwise disrupt the coding potential of intron-containing transcripts. This process takes place in the nucleus, catalyzed by a large RNA-protein complex called the spliceosome. Prp8p, one of the largest and most highly conserved of nuclear proteins, occupies a central position in the catalytic core of the spliceosome, and has been implicated in several crucial molecular rearrangements that occur there. Recently, Prp8p has also come under the spotlight for its role in the inherited human disease, Retinitis Pigmentosa.Prp8 is unique, having no obvious homology to other proteins; however, using bioinformatical analysis we reveal the presence of a conserved RNA recognition motif (RRM), an MPN/JAB domain and a putative nuclear localization signal (NLS). Here, we review biochemical and genetical data, mostly related to the human and yeast proteins, that describe Prp8's central role within the spliceosome and its molecular interactions during spliceosome formation, as splicing proceeds, and in post-splicing complexes.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15840809      PMCID: PMC1370742          DOI: 10.1261/rna.2220705

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  222 in total

1.  Composition and functional characterization of the yeast spliceosomal penta-snRNP.

Authors:  Scott W Stevens; Daniel E Ryan; Helen Y Ge; Roger E Moore; Mary K Young; Terry D Lee; John Abelson
Journal:  Mol Cell       Date:  2002-01       Impact factor: 17.970

2.  Directed proteomic analysis of the human nucleolus.

Authors:  Jens S Andersen; Carol E Lyon; Archa H Fox; Anthony K L Leung; Yun Wah Lam; Hanno Steen; Matthias Mann; Angus I Lamond
Journal:  Curr Biol       Date:  2002-01-08       Impact factor: 10.834

3.  Clinical characterization, linkage analysis, and PRPC8 mutation analysis of a family with autosomal dominant retinitis pigmentosa type 13 (RP13).

Authors:  J J C van Lith-Verhoeven; S D van der Velde-Visser; M M Sohocki; A F Deutman; H M A Brink; F P M Cremers; C B Hoyng
Journal:  Ophthalmic Genet       Date:  2002-03       Impact factor: 1.803

Review 4.  Integrating mRNA processing with transcription.

Authors:  Nick J Proudfoot; Andre Furger; Michael J Dye
Journal:  Cell       Date:  2002-02-22       Impact factor: 41.582

5.  Functional organization of the yeast proteome by systematic analysis of protein complexes.

Authors:  Anne-Claude Gavin; Markus Bösche; Roland Krause; Paola Grandi; Martina Marzioch; Andreas Bauer; Jörg Schultz; Jens M Rick; Anne-Marie Michon; Cristina-Maria Cruciat; Marita Remor; Christian Höfert; Malgorzata Schelder; Miro Brajenovic; Heinz Ruffner; Alejandro Merino; Karin Klein; Manuela Hudak; David Dickson; Tatjana Rudi; Volker Gnau; Angela Bauch; Sonja Bastuck; Bettina Huhse; Christina Leutwein; Marie-Anne Heurtier; Richard R Copley; Angela Edelmann; Erich Querfurth; Vladimir Rybin; Gerard Drewes; Manfred Raida; Tewis Bouwmeester; Peer Bork; Bertrand Seraphin; Bernhard Kuster; Gitte Neubauer; Giulio Superti-Furga
Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

6.  Proteomics analysis reveals stable multiprotein complexes in both fission and budding yeasts containing Myb-related Cdc5p/Cef1p, novel pre-mRNA splicing factors, and snRNAs.

Authors:  Melanie D Ohi; Andrew J Link; Liping Ren; Jennifer L Jennings; W Hayes McDonald; Kathleen L Gould
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

7.  A nuclear-encoded intein in the fungal pathogen Cryptococcus neoformans.

Authors:  M I Butler; T J Goodwin; R T Poulter
Journal:  Yeast       Date:  2001-11       Impact factor: 3.239

8.  Removal of a single alpha-tubulin gene intron suppresses cell cycle arrest phenotypes of splicing factor mutations in Saccharomyces cerevisiae.

Authors:  C Geoffrey Burns; Ryoma Ohi; Sapna Mehta; Eileen T O'Toole; Mark Winey; Tyson A Clark; Charles W Sugnet; Manuel Ares; Kathleen L Gould
Journal:  Mol Cell Biol       Date:  2002-02       Impact factor: 4.272

9.  Protein 61K, encoded by a gene (PRPF31) linked to autosomal dominant retinitis pigmentosa, is required for U4/U6*U5 tri-snRNP formation and pre-mRNA splicing.

Authors:  Olga V Makarova; Evgeny M Makarov; Sunbin Liu; Hans-Peter Vornlocher; Reinhard Lührmann
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

10.  Mutations in HPRP3, a third member of pre-mRNA splicing factor genes, implicated in autosomal dominant retinitis pigmentosa.

Authors:  Christina F Chakarova; Matthew M Hims; Hanno Bolz; Leen Abu-Safieh; Reshma J Patel; Myrto G Papaioannou; Chris F Inglehearn; T Jeffrey Keen; Catherine Willis; Anthony T Moore; Thomas Rosenberg; Andrew R Webster; Alan C Bird; Andreas Gal; David Hunt; Eranga N Vithana; Shomi S Bhattacharya
Journal:  Hum Mol Genet       Date:  2002-01-01       Impact factor: 6.150

View more
  162 in total

1.  CEF1/CDC5 alleles modulate transitions between catalytic conformations of the spliceosome.

Authors:  Charles C Query; Maria M Konarska
Journal:  RNA       Date:  2012-03-08       Impact factor: 4.942

2.  An antisense microwalk reveals critical role of an intronic position linked to a unique long-distance interaction in pre-mRNA splicing.

Authors:  Natalia N Singh; Katrin Hollinger; Dhruva Bhattacharya; Ravindra N Singh
Journal:  RNA       Date:  2010-04-22       Impact factor: 4.942

3.  Protein localisation by electron microscopy reveals the architecture of the yeast spliceosomal B complex.

Authors:  Norbert Rigo; Chengfu Sun; Patrizia Fabrizio; Berthold Kastner; Reinhard Lührmann
Journal:  EMBO J       Date:  2015-11-18       Impact factor: 11.598

Review 4.  Pre-mRNA splicing and retinitis pigmentosa.

Authors:  Daniel Mordes; Xiaoyan Luo; Amar Kar; David Kuo; Lili Xu; Kazuo Fushimi; Guowu Yu; Paul Sternberg; Jane Y Wu
Journal:  Mol Vis       Date:  2006-10-26       Impact factor: 2.367

5.  Inhibition of a spliceosome turnover pathway suppresses splicing defects.

Authors:  Shatakshi Pandit; Bert Lynn; Brian C Rymond
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-31       Impact factor: 11.205

6.  The EF-G-like GTPase Snu114p regulates spliceosome dynamics mediated by Brr2p, a DExD/H box ATPase.

Authors:  Eliza C Small; Stephanie R Leggett; Adrienne A Winans; Jonathan P Staley
Journal:  Mol Cell       Date:  2006-08-04       Impact factor: 17.970

7.  Ubiquitin binding by a variant Jab1/MPN domain in the essential pre-mRNA splicing factor Prp8p.

Authors:  Priya Bellare; Alan K Kutach; Amy K Rines; Christine Guthrie; Erik J Sontheimer
Journal:  RNA       Date:  2006-02       Impact factor: 4.942

8.  The network of protein-protein interactions within the human U4/U6.U5 tri-snRNP.

Authors:  Sunbin Liu; Reinhard Rauhut; Hans-Peter Vornlocher; Reinhard Lührmann
Journal:  RNA       Date:  2006-05-24       Impact factor: 4.942

9.  Crystal structure of the C-terminal domain of splicing factor Prp8 carrying retinitis pigmentosa mutants.

Authors:  Lingdi Zhang; Jingping Shen; Michael T Guarnieri; Annie Heroux; Kui Yang; Rui Zhao
Journal:  Protein Sci       Date:  2007-05-01       Impact factor: 6.725

10.  The Isy1p component of the NineTeen complex interacts with the ATPase Prp16p to regulate the fidelity of pre-mRNA splicing.

Authors:  Tommaso Villa; Christine Guthrie
Journal:  Genes Dev       Date:  2005-08-15       Impact factor: 11.361

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.