Literature DB >> 15840642

A resource of 5,814 dissociation transposon-tagged and sequence-indexed lines of Arabidopsis transposed from start loci on chromosome 5.

Takuya Ito1, Reiko Motohashi, Takashi Kuromori, Yoshiteru Noutoshi, Motoaki Seki, Asako Kamiya, Saho Mizukado, Tetsuya Sakurai, Kazuo Shinozaki.   

Abstract

We report here the generation of an additional collection of Dissociation (Ds) transposon-tagged, sequence-indexed lines of Arabidopsis thaliana. Our RIKEN Ds insertion collection now totals 17,668 lines. Our collection has preferential insertions in chromosomes 1 and 5, because Ds was transposed from start loci on those chromosomes (11,854 and 5,814 lines, respectively). We describe here features of the latter 5,814 lines. The former 11,854 lines have been described previously. We have created a searchable database of the insertion sites and mutated genes (http://rarge.gsc.riken.jp/), and are depositing these lines in the RIKEN BioResource Center (http://www.brc.riken.go.jp/lab/epd/Eng/). Our collection of these mutants will contribute to progress in functional genomics of plants.

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Year:  2005        PMID: 15840642     DOI: 10.1093/pcp/pci112

Source DB:  PubMed          Journal:  Plant Cell Physiol        ISSN: 0032-0781            Impact factor:   4.927


  26 in total

1.  Reversed end Ds element: a novel tool for chromosome engineering in Arabidopsis.

Authors:  Lakshminarasimhan Krishnaswamy; Jianbo Zhang; Thomas Peterson
Journal:  Plant Mol Biol       Date:  2008-08-07       Impact factor: 4.076

2.  Characterization of a potato activation-tagged mutant, nikku, and its partial revertant.

Authors:  Sukhwinder S Aulakh; Richard E Veilleux; Guozhu Tang; Barry S Flinn
Journal:  Planta       Date:  2015-03-13       Impact factor: 4.116

3.  High-throughput generation of an activation-tagged mutant library for functional genomic analyses in tobacco.

Authors:  Feng Liu; Daping Gong; Qian Zhang; Dawei Wang; Mengmeng Cui; Zhiguo Zhang; Guanshan Liu; Jinxia Wu; Yuanying Wang
Journal:  Planta       Date:  2014-11-19       Impact factor: 4.116

4.  Cysteine-generated sulfide in the cytosol negatively regulates autophagy and modulates the transcriptional profile in Arabidopsis.

Authors:  Consolación Álvarez; Irene García; Inmaculada Moreno; María Esther Pérez-Pérez; José L Crespo; Luis C Romero; Cecilia Gotor
Journal:  Plant Cell       Date:  2012-11-09       Impact factor: 11.277

5.  A versatile transposon-based activation tag vector system for functional genomics in cereals and other monocot plants.

Authors:  Shaohong Qu; Aparna Desai; Rod Wing; Venkatesan Sundaresan
Journal:  Plant Physiol       Date:  2007-11-09       Impact factor: 8.340

6.  A heterocomplex of iron superoxide dismutases defends chloroplast nucleoids against oxidative stress and is essential for chloroplast development in Arabidopsis.

Authors:  Fumiyoshi Myouga; Chieko Hosoda; Taishi Umezawa; Haruko Iizumi; Takashi Kuromori; Reiko Motohashi; Yuriko Shono; Noriko Nagata; Masahiko Ikeuchi; Kazuo Shinozaki
Journal:  Plant Cell       Date:  2008-11-07       Impact factor: 11.277

7.  An O-acetylserine(thiol)lyase homolog with L-cysteine desulfhydrase activity regulates cysteine homeostasis in Arabidopsis.

Authors:  Consolación Alvarez; Leticia Calo; Luis C Romero; Irene García; Cecilia Gotor
Journal:  Plant Physiol       Date:  2009-12-02       Impact factor: 8.340

8.  Pentatricopeptide repeat proteins with the DYW motif have distinct molecular functions in RNA editing and RNA cleavage in Arabidopsis chloroplasts.

Authors:  Kenji Okuda; Anne-Laure Chateigner-Boutin; Takahiro Nakamura; Etienne Delannoy; Mamoru Sugita; Fumiyoshi Myouga; Reiko Motohashi; Kazuo Shinozaki; Ian Small; Toshiharu Shikanai
Journal:  Plant Cell       Date:  2009-01-30       Impact factor: 11.277

9.  Conserved domain structure of pentatricopeptide repeat proteins involved in chloroplast RNA editing.

Authors:  Kenji Okuda; Fumiyoshi Myouga; Reiko Motohashi; Kazuo Shinozaki; Toshiharu Shikanai
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-02       Impact factor: 11.205

10.  Arabidopsis Hormone Database: a comprehensive genetic and phenotypic information database for plant hormone research in Arabidopsis.

Authors:  Zhi-yu Peng; Xin Zhou; Linchuan Li; Xiangchun Yu; Hongjiang Li; Zhiqiang Jiang; Guangyu Cao; Mingyi Bai; Xingchun Wang; Caifu Jiang; Haibin Lu; Xianhui Hou; Lijia Qu; Zhiyong Wang; Jianru Zuo; Xiangdong Fu; Zhen Su; Songgang Li; Hongwei Guo
Journal:  Nucleic Acids Res       Date:  2008-11-10       Impact factor: 16.971

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