Literature DB >> 15840560

The end of "naive reductionism": rise of systems biology or renaissance of physiology?

Kevin Strange1.   

Abstract

Systems biology is an emerging discipline focused on tackling the enormous intellectual and technical challenges associated with translating genome sequence into a comprehensive understanding of how organisms are built and run. Physiology and systems biology share the goal of understanding the integrated function of complex, multicomponent biological systems ranging from interacting proteins that carry out specific tasks to whole organisms. Despite this common ground, physiology as an academic discipline runs the real risk of fading into the background and being superseded organizationally and administratively by systems biology. My goal in this article is to discuss briefly the cornerstones of modern systems biology, specifically functional genomics, nonmammalian model organisms and computational biology, and to emphasize the need to embrace them as essential components of 21st-century physiology departments and research and teaching programs.

Mesh:

Year:  2005        PMID: 15840560     DOI: 10.1152/ajpcell.00598.2004

Source DB:  PubMed          Journal:  Am J Physiol Cell Physiol        ISSN: 0363-6143            Impact factor:   4.249


  22 in total

Review 1.  The use of high-dimensional biology (genomics, transcriptomics, proteomics, and metabolomics) to understand the preterm parturition syndrome.

Authors:  R Romero; J Espinoza; F Gotsch; J P Kusanovic; L A Friel; O Erez; S Mazaki-Tovi; N G Than; S Hassan; G Tromp
Journal:  BJOG       Date:  2006-12       Impact factor: 6.531

Review 2.  Towards systems biology of human pulmonary fibrosis.

Authors:  Sean M Studer; Naftali Kaminski
Journal:  Proc Am Thorac Soc       Date:  2007-01

3.  Signature pathways identified from gene expression profiles in the human uterine cervix before and after spontaneous term parturition.

Authors:  Sonia S Hassan; Roberto Romero; Adi L Tarca; Sorin Draghici; Beth Pineles; Andrej Bugrim; Nahla Khalek; Natalia Camacho; Pooja Mittal; Bo Hyun Yoon; Jimmy Espinoza; Chong Jai Kim; Yoram Sorokin; John Malone
Journal:  Am J Obstet Gynecol       Date:  2007-09       Impact factor: 8.661

Review 4.  Homeostasis of exercise hyperpnea and optimal sensorimotor integration: the internal model paradigm.

Authors:  Chi-Sang Poon; Chung Tin; Yunguo Yu
Journal:  Respir Physiol Neurobiol       Date:  2007-03-07       Impact factor: 1.931

Review 5.  Translational physiology: from molecules to public health.

Authors:  Douglas R Seals
Journal:  J Physiol       Date:  2013-06-03       Impact factor: 5.182

Review 6.  The microcirculation: physiology at the mesoscale.

Authors:  Timothy W Secomb; Axel R Pries
Journal:  J Physiol       Date:  2011-01-17       Impact factor: 5.182

Review 7.  Mouse models for liver cancer.

Authors:  Latifa Bakiri; Erwin F Wagner
Journal:  Mol Oncol       Date:  2013-02-05       Impact factor: 6.603

8.  Altered retinoic acid metabolism in diabetic mouse kidney identified by O isotopic labeling and 2D mass spectrometry.

Authors:  Jonathan M Starkey; Yingxin Zhao; Rovshan G Sadygov; Sigmund J Haidacher; Wanda S Lejeune; Nilay Dey; Bruce A Luxon; Maureen A Kane; Joseph L Napoli; Larry Denner; Ronald G Tilton
Journal:  PLoS One       Date:  2010-06-14       Impact factor: 3.240

9.  The roots of bioinformatics.

Authors:  David B Searls
Journal:  PLoS Comput Biol       Date:  2010-06-24       Impact factor: 4.475

Review 10.  So what do we really mean when we say that systems biology is holistic?

Authors:  Derek Gatherer
Journal:  BMC Syst Biol       Date:  2010-03-12
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