Literature DB >> 15837180

A cradle for new proteins: trigger factor at the ribosome.

Timm Maier1, Lars Ferbitz, Elke Deuerling, Nenad Ban.   

Abstract

Newly synthesized proteins leave the ribosome through a narrow tunnel in the large subunit. During ongoing synthesis, nascent protein chains are particularly sensitive to aggregation and degradation because they emerge from the ribosome in an unfolded state. In bacteria, the first protein to interact with nascent chains and facilitate their folding is the ribosome-associated chaperone trigger factor. Recently, crystal structures of trigger factor and of its ribosome-binding domain in complex with the large ribosomal subunit revealed that the chaperone adopts an extended 'dragon-shaped' fold with a large hydrophobic cradle, which arches over the exit of the ribosomal tunnel and shields newly synthesized proteins. These structural results, together with recent biochemical data on trigger factor and its interplay with other chaperones and factors that interact with the nascent chain, provide a comprehensive view of the role of trigger factor during co-translational protein folding.

Mesh:

Substances:

Year:  2005        PMID: 15837180     DOI: 10.1016/j.sbi.2005.03.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  31 in total

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Authors:  Paul Dominic B Olinares; Lalit Ponnala; Klaas J van Wijk
Journal:  Mol Cell Proteomics       Date:  2010-04-26       Impact factor: 5.911

2.  Versatility of trigger factor interactions with ribosome-nascent chain complexes.

Authors:  Sathish Kumar Lakshmipathy; Rashmi Gupta; Stefan Pinkert; Stephanie Anne Etchells; F Ulrich Hartl
Journal:  J Biol Chem       Date:  2010-07-01       Impact factor: 5.157

3.  Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome reveals its chaperone action.

Authors:  David Baram; Erez Pyetan; Assa Sittner; Tamar Auerbach-Nevo; Anat Bashan; Ada Yonath
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-09       Impact factor: 11.205

Review 4.  The Mechanism and Function of Group II Chaperonins.

Authors:  Tom Lopez; Kevin Dalton; Judith Frydman
Journal:  J Mol Biol       Date:  2015-04-30       Impact factor: 5.469

Review 5.  Integrating protein homeostasis strategies in prokaryotes.

Authors:  Axel Mogk; Damon Huber; Bernd Bukau
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-04-01       Impact factor: 10.005

Review 6.  Chemical and biological approaches for adapting proteostasis to ameliorate protein misfolding and aggregation diseases: progress and prognosis.

Authors:  Susan L Lindquist; Jeffery W Kelly
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-12-01       Impact factor: 10.005

7.  Aglycosylated antibodies and antibody fragments produced in a scalable in vitro transcription-translation system.

Authors:  Gang Yin; Eudean D Garces; Junhao Yang; Juan Zhang; Cuong Tran; Alexander R Steiner; Christine Roos; Sunil Bajad; Susan Hudak; Kalyani Penta; James Zawada; Sonia Pollitt; Christopher J Murray
Journal:  MAbs       Date:  2012-03-01       Impact factor: 5.857

8.  Comprehensive analysis of the effects of Escherichia coli ORFs on protein translation reaction.

Authors:  Yasuaki Kazuta; Jiro Adachi; Tomoaki Matsuura; Naoaki Ono; Hirotada Mori; Tetsuya Yomo
Journal:  Mol Cell Proteomics       Date:  2008-05-02       Impact factor: 5.911

9.  PpiD is a player in the network of periplasmic chaperones in Escherichia coli.

Authors:  Yvonne Matern; Birgitta Barion; Susanne Behrens-Kneip
Journal:  BMC Microbiol       Date:  2010-09-29       Impact factor: 3.605

10.  Quantifying epistatic interactions among the components constituting the protein translation system.

Authors:  Tomoaki Matsuura; Yasuaki Kazuta; Takuyo Aita; Jiro Adachi; Tetsuya Yomo
Journal:  Mol Syst Biol       Date:  2009-08-18       Impact factor: 11.429

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