Literature DB >> 15831386

Functional ingredient production: application of global metabolic models.

Eddy J Smid1, Douwe Molenaar, Jeroen Hugenholtz, Willem M de Vos, Bas Teusink.   

Abstract

The biotechnology industry continuously explores new ways to improve the performance of microbial strains in fermentation processes. Recent focus has been on new genome-wide modelling approaches in functional genomics, which aim to take full advantage of genome sequence data, transcription profiling, proteomics and metabolite profiling for strain improvement. The integration of global metabolic models with genetic and regulatory models will be essential for the practice of metabolic engineering for strain improvement to move forward, simply because we cannot rely on our intuition to grasp the complexity of the biological systems involved.

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Year:  2005        PMID: 15831386     DOI: 10.1016/j.copbio.2005.03.001

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  6 in total

1.  Complete genome sequence of the prototype lactic acid bacterium Lactococcus lactis subsp. cremoris MG1363.

Authors:  Udo Wegmann; Mary O'Connell-Motherway; Aldert Zomer; Girbe Buist; Claire Shearman; Carlos Canchaya; Marco Ventura; Alexander Goesmann; Michael J Gasson; Oscar P Kuipers; Douwe van Sinderen; Jan Kok
Journal:  J Bacteriol       Date:  2007-02-16       Impact factor: 3.490

Review 2.  'Unknown' proteins and 'orphan' enzymes: the missing half of the engineering parts list--and how to find it.

Authors:  Andrew D Hanson; Anne Pribat; Jeffrey C Waller; Valérie de Crécy-Lagard
Journal:  Biochem J       Date:  2009-12-14       Impact factor: 3.857

Review 3.  Systems solutions by lactic acid bacteria: from paradigms to practice.

Authors:  Willem M de Vos
Journal:  Microb Cell Fact       Date:  2011-08-30       Impact factor: 5.328

Review 4.  Functional implications of the microbial community structure of undefined mesophilic starter cultures.

Authors:  Eddy J Smid; Oylum Erkus; Maciej Spus; Judith C M Wolkers-Rooijackers; Svetlana Alexeeva; Michiel Kleerebezem
Journal:  Microb Cell Fact       Date:  2014-08-29       Impact factor: 5.328

5.  Comparison of quenching and extraction methodologies for metabolome analysis of Lactobacillus plantarum.

Authors:  Magda Faijes; Astrid E Mars; Eddy J Smid
Journal:  Microb Cell Fact       Date:  2007-08-20       Impact factor: 5.328

6.  Modeling Neisseria meningitidis metabolism: from genome to metabolic fluxes.

Authors:  Gino J E Baart; Bert Zomer; Alex de Haan; Leo A van der Pol; E Coen Beuvery; Johannes Tramper; Dirk E Martens
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

  6 in total

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