Literature DB >> 15820987

Rice morphogenesis and plant architecture: measurement, specification and the reconstruction of structural development by 3D architectural modelling.

Tomonari Watanabe1, Jim S Hanan, Peter M Room, Toshihiro Hasegawa, Hiroshi Nakagawa, Wataru Takahashi.   

Abstract

BACKGROUND AND AIMS: The morphogenesis and architecture of a rice plant, Oryza sativa, are critical factors in the yield equation, but they are not well studied because of the lack of appropriate tools for 3D measurement. The architecture of rice plants is characterized by a large number of tillers and leaves. The aims of this study were to specify rice plant architecture and to find appropriate functions to represent the 3D growth across all growth stages.
METHODS: A japonica type rice, 'Namaga', was grown in pots under outdoor conditions. A 3D digitizer was used to measure the rice plant structure at intervals from the young seedling stage to maturity. The L-system formalism was applied to create '3D virtual rice' plants, incorporating models of phenological development and leaf emergence period as a function of temperature and photoperiod, which were used to determine the timing of tiller emergence. KEY
RESULTS: The relationships between the nodal positions and leaf lengths, leaf angles and tiller angles were analysed and used to determine growth functions for the models. The '3D virtual rice' reproduces the structural development of isolated plants and provides a good estimation of the tillering process, and of the accumulation of leaves.
CONCLUSIONS: The results indicated that the '3D virtual rice' has a possibility to demonstrate the differences in the structure and development between cultivars and under different environmental conditions. Future work, necessary to reflect both cultivar and environmental effects on the model performance, and to link with physiological models, is proposed in the discussion.

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Year:  2005        PMID: 15820987      PMCID: PMC4246908          DOI: 10.1093/aob/mci136

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  2 in total

1.  Green revolution: a mutant gibberellin-synthesis gene in rice.

Authors:  A Sasaki; M Ashikari; M Ueguchi-Tanaka; H Itoh; A Nishimura; D Swapan; K Ishiyama; T Saito; M Kobayashi; G S Khush; H Kitano; M Matsuoka
Journal:  Nature       Date:  2002-04-18       Impact factor: 49.962

2.  Mathematical models for cellular interactions in development. I. Filaments with one-sided inputs.

Authors:  A Lindenmayer
Journal:  J Theor Biol       Date:  1968-03       Impact factor: 2.691

  2 in total
  22 in total

1.  ALAMEDA, a structural-functional model for faba bean crops: morphological parameterization and verification.

Authors:  Margarita Ruiz-Ramos; M Inés Mínguez
Journal:  Ann Bot       Date:  2006-01-03       Impact factor: 4.357

2.  A functional-structural model of rice linking quantitative genetic information with morphological development and physiological processes.

Authors:  Lifeng Xu; Michael Henke; Jun Zhu; Winfried Kurth; Gerhard Buck-Sorlin
Journal:  Ann Bot       Date:  2011-01-18       Impact factor: 4.357

3.  Introducing turgor-driven growth dynamics into functional-structural plant models.

Authors:  Jonas R Coussement; Tom De Swaef; Peter Lootens; Isabel Roldán-Ruiz; Kathy Steppe
Journal:  Ann Bot       Date:  2018-04-18       Impact factor: 4.357

4.  Turgor-driven plant growth applied in a soybean functional-structural plant model.

Authors:  Jonas R Coussement; Tom De Swaef; Peter Lootens; Kathy Steppe
Journal:  Ann Bot       Date:  2020-09-14       Impact factor: 4.357

Review 5.  Computational morphodynamics: a modeling framework to understand plant growth.

Authors:  Vijay Chickarmane; Adrienne H K Roeder; Paul T Tarr; Alexandre Cunha; Cory Tobin; Elliot M Meyerowitz
Journal:  Annu Rev Plant Biol       Date:  2010       Impact factor: 26.379

6.  Computational complementation: a modelling approach to study signalling mechanisms during legume autoregulation of nodulation.

Authors:  Liqi Han; Jim Hanan; Peter M Gresshoff
Journal:  PLoS Comput Biol       Date:  2010-02-26       Impact factor: 4.475

7.  Automated recovery of three-dimensional models of plant shoots from multiple color images.

Authors:  Michael P Pound; Andrew P French; Erik H Murchie; Tony P Pridmore
Journal:  Plant Physiol       Date:  2014-10-20       Impact factor: 8.340

8.  Three-dimensional modeling of tea-shoots using images and models.

Authors:  Jian Wang; Xianyin Zeng; Jianbing Liu
Journal:  Sensors (Basel)       Date:  2011-03-29       Impact factor: 3.576

9.  The leaf angle distribution of natural plant populations: assessing the canopy with a novel software tool.

Authors:  Mark Müller-Linow; Francisco Pinto-Espinosa; Hanno Scharr; Uwe Rascher
Journal:  Plant Methods       Date:  2015-02-26       Impact factor: 4.993

Review 10.  Modeling branching in cereals.

Authors:  Jochem B Evers; Jan Vos
Journal:  Front Plant Sci       Date:  2013-10-10       Impact factor: 5.753

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