Literature DB >> 15817792

Biochemical and molecular characterization of a periplasmic hydrolase for oxidized polyvinyl alcohol from Sphingomonas sp. strain 113P3.

Wilailak Klomklang1, Akio Tani1, Kazuhide Kimbara1, Rie Mamoto2, Takashi Ueda2, Masayuki Shimao3, Fusako Kawai1.   

Abstract

Oxidized polyvinyl alcohol hydrolase (OPH) and polyvinyl alcohol dehydrogenase were found to be constitutively present in the periplasm of Sphingomonas sp. strain 113P3 (formerly Pseudomonas sp. 113P3). The OPH was purified to homogeneity with a yield of 40 % and a 5.9-fold increase in specific activity. The enzyme was a homodimer consisting of 35 kDa subunits. Its activity was inhibited by PMSF, Hg(2+) and Zn(2+). The enzyme hydrolysed oxidized polyvinyl alcohol (oxidized PVA) and p-nitrophenyl acetate (PNPA), but did not hydrolyse any of the mono- or diketones tested. K(m) and V(max) values for oxidized PVA and PNPA were 0.2 and 0.3 mM, and 0.1 and 3.4 micromol min(-1) mg(-1), respectively. The gene for OPH was cloned and sequenced. Sequencing analysis revealed that the open reading frame consisted of 1095 bp, corresponding to a protein of 364 amino acids residues, encoding a signal peptide and a mature protein of 34 and 330 amino acids residues, respectively. The presence of a serine-hydrolase motif (a lipase box; Gly-X-Ser-X-Gly) strongly suggested that the enzyme belongs to the serine-hydrolase family. The protein exhibited homology with OPH of the Pseudomonas sp. strain VM15C (63 % identity) and the polyhydroxybutyrate depolymerases from Mesorhizobium loti, Rhizobium sp. and Sinorhizobium meliloti (29-32 % identity). The oph gene was expressed in Escherichia coli under the control of the lac promoter. The recombinant protein had the same molecular mass and N-terminal amino acid sequence as the purified OPH from strain 113P3.

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Year:  2005        PMID: 15817792     DOI: 10.1099/mic.0.27655-0

Source DB:  PubMed          Journal:  Microbiology        ISSN: 1350-0872            Impact factor:   2.777


  4 in total

1.  A novel esterase DacApva from Comamonas sp. strain NyZ500 with deacetylation activity for acetylated polymer polyvinyl alcohol.

Authors:  Chao-Fan Yin; Ying Xu; Shi-Kai Deng; Wen-Long Yue; Ning-Yi Zhou
Journal:  Appl Environ Microbiol       Date:  2021-02-05       Impact factor: 4.792

2.  Expression and fermentation optimization of oxidized polyvinyl alcohol hydrolase in E. coli.

Authors:  Yu Yang; Dongxu Zhang; Song Liu; Dongxu Jia; Guocheng Du; Jian Chen
Journal:  J Ind Microbiol Biotechnol       Date:  2011-06-22       Impact factor: 3.346

3.  Bioinformatics Analysis and Characterization of Highly Efficient Polyvinyl Alcohol (PVA)-Degrading Enzymes from the Novel PVA Degrader Stenotrophomonas rhizophila QL-P4.

Authors:  Yahong Wei; Jing Fu; Jianying Wu; Xinmiao Jia; Yunheng Zhou; Cuidan Li; Mengxing Dong; Shanshan Wang; Ju Zhang; Fei Chen
Journal:  Appl Environ Microbiol       Date:  2017-12-15       Impact factor: 4.792

4.  Complete Genome Sequence of Polyvinyl Alcohol-Degrading Strain Sphingopyxis sp. 113P3 (NBRC 111507).

Authors:  Yoshiyuki Ohtsubo; Yuji Nagata; Mitsuru Numata; Kieko Tsuchikane; Akira Hosoyama; Atsushi Yamazoe; Masataka Tsuda; Nobuyuki Fujita; Fusako Kawai
Journal:  Genome Announc       Date:  2015-10-15
  4 in total

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