Literature DB >> 15803468

Structured model for denitrifier diauxic growth.

Ryan Hamilton1, Anna Casasús, Madeline Rasche, Atul Narang, Spyros A Svoronos, Ben Koopman.   

Abstract

We present a model for diauxic growth of denitrifying bacteria in which nitrate reductase synthesis kinetics dominate the overall growth kinetics. The model is based on the assumption of the existence of a nitrate respiration operon, thereby linking the rate of nitrate uptake to the activity of nitrate reductase. We show that this approach can model diauxic growth of Pseudomonas denitrificans by conducting experiments in which nitrate reductase activity was measured during both lag and ensuing exponential growth phases. We consistently observed the pattern of low nitrate reductase enzyme activity during the lag phase, increasing before the onset of growth. By fitting model parameters we were able to successfully match experimental data for growth, nitrate uptake, and enzyme activity level. (c) 2005 Wiley Periodicals, Inc.

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Year:  2005        PMID: 15803468     DOI: 10.1002/bit.20462

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  1 in total

1.  Low probability of initiating nirS transcription explains observed gas kinetics and growth of bacteria switching from aerobic respiration to denitrification.

Authors:  Junaid Hassan; Linda L Bergaust; I David Wheat; Lars R Bakken
Journal:  PLoS Comput Biol       Date:  2014-11-06       Impact factor: 4.475

  1 in total

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